Desulfovibrio vulgaris Hildenborough Module 8 Residual: 0.45 | Syntrophy Portal

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Summary

Residual: 0.45 Score: -54.7142 version: dvh_cmonkey_11_Mar_02

Members

DVU0252 Uncharacterized protein Details for DVU0252 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0252 Tuberculist Genomic Region	DVU1285 Response regulator Details for DVU1285 - Response regulator GO Terms: GO:0000160 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1285 Tuberculist Genomic Region
DVU0268 Uncharacterized protein Details for DVU0268 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0268 Tuberculist Genomic Region	DVU1637 Uncharacterized protein Details for DVU1637 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1637 Tuberculist Genomic Region
DVU0472 Uncharacterized protein Details for DVU0472 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0472 Tuberculist Genomic Region	DVU1638 Conserved domain protein Details for DVU1638 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1638 Tuberculist Genomic Region
DVU0473 Uncharacterized protein Details for DVU0473 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0473 Tuberculist Genomic Region	DVU1639 Conserved domain protein Details for DVU1639 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1639 Tuberculist Genomic Region
DVU0553 Uncharacterized protein Details for DVU0553 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0553 Tuberculist Genomic Region	DVU1646 Arsenate reductase Details for DVU1646 - Arsenate reductase GO Terms: GO:0008794, GO:0004725 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1646 Tuberculist Genomic Region
DVU0630 Uncharacterized protein Details for DVU0630 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0630 Tuberculist Genomic Region	DVU2145 Chloramphenicol acetyltransferase, putative Details for DVU2145 - Chloramphenicol acetyltransferase, putative GO Terms: GO:0008811 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2145 Tuberculist Genomic Region
DVU0916 Redox-sensing transcriptional repressor Rex Details for DVU0916 - Redox-sensing transcriptional repressor Rex GO Terms: GO:0003677, GO:0050662, GO:0005737, GO:0045892, GO:0051775, GO:0003700, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0916 Tuberculist Genomic Region	DVU2146 Uncharacterized protein Details for DVU2146 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2146 Tuberculist Genomic Region
DVU0939 Uncharacterized protein Details for DVU0939 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0939 Tuberculist Genomic Region	DVU2725 Membrane protein, putative Details for DVU2725 - Membrane protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2725 Tuberculist Genomic Region
DVU1015 Uncharacterized protein Details for DVU1015 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1015 Tuberculist Genomic Region	DVU2726 Uncharacterized protein Details for DVU2726 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2726 Tuberculist Genomic Region
DVU1155 Uncharacterized protein Details for DVU1155 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1155 Tuberculist Genomic Region	DVU3080 Transcriptional regulator, putative Details for DVU3080 - Transcriptional regulator, putative GO Terms: GO:0003677, GO:0006355, GO:0008270 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3080 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.00000000018 Motif 2:

e-value: 0.00000000027

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1142 Transcriptional regulator, putative	down-regulates	-0.13	DVU1142
DVU1331 Transcriptional regulator, LysR family	up-regulates	0.11	DVU1331
DVU1572 Transcriptional regulator, CarD family	up-regulates	0.11	DVU1572
DVU1760 Transcriptional regulator, TetR family	up-regulates	0.17	DVU1760
DVU2532 Transcriptional regulator, MerR family	up-regulates	0.10	DVU2532
DVU2836 Uncharacterized protein	up-regulates	0.27	DVU2836

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0008374	O-acyltransferase activity	3	0.01	1	0.0093
MF	GO:0016407	acetyltransferase activity	7	0.02	1	0.0217

Essentiality

Comments

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