Desulfovibrio vulgaris Hildenborough Module 16 Residual: 0.48

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Residual: 0.48 Score: -36.8154 version: dvh_cmonkey_11_Mar_02
DVU0407 Rare lipoprotein A family protein

Details for DVU0407 - Rare lipoprotein A family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0407

Tuberculist Genomic Region

DVU1656 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

Details for DVU1656 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

GO Terms: GO:0003848, GO:0009396, GO:0016301

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1656

Tuberculist Genomic Region

DVU0941 Peptidase, M16 family

Details for DVU0941 - Peptidase, M16 family

GO Terms: GO:0003824, GO:0046872, GO:0006508

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0941

Tuberculist Genomic Region

DVU1850 CBS domain protein

Details for DVU1850 - CBS domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1850

Tuberculist Genomic Region

DVU1005 Uncharacterized protein

Details for DVU1005 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1005

Tuberculist Genomic Region

DVU1861 Peptide chain release factor 2

Details for DVU1861 - Peptide chain release factor 2

GO Terms: GO:0005737, GO:0016149

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1861

Tuberculist Genomic Region

DVU1244 Uncharacterized protein

Details for DVU1244 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1244

Tuberculist Genomic Region

DVU1867 Diaminopimelate epimerase

Details for DVU1867 - Diaminopimelate epimerase

GO Terms: GO:0005737, GO:0008837, GO:0009089

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1867

Tuberculist Genomic Region

DVU1335 ATP-dependent Clp protease proteolytic subunit

Details for DVU1335 - ATP-dependent Clp protease proteolytic subunit

GO Terms: GO:0005737, GO:0004252

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1335

Tuberculist Genomic Region

DVU2201 Alcohol dehydrogenase, iron-containing

Details for DVU2201 - Alcohol dehydrogenase, iron-containing

GO Terms: GO:0046872, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2201

Tuberculist Genomic Region

DVU1572 Transcriptional regulator, CarD family

Details for DVU1572 - Transcriptional regulator, CarD family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1572

Tuberculist Genomic Region

DVU2609 Chemotaxis MotB protein, putative

Details for DVU2609 - Chemotaxis MotB protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2609

Tuberculist Genomic Region

DVU1582 Uncharacterized protein

Details for DVU1582 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1582

Tuberculist Genomic Region

DVU2650 Uncharacterized protein

Details for DVU2650 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2650

Tuberculist Genomic Region

DVU1612 ACT domain protein

Details for DVU1612 - ACT domain protein

GO Terms: GO:0016597, GO:0008152

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1612

Tuberculist Genomic Region

DVU2655 D-alanyl-D-alanine carboxypeptidase family protein

Details for DVU2655 - D-alanyl-D-alanine carboxypeptidase family protein

GO Terms: GO:0009002

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2655

Tuberculist Genomic Region

DVU1647 Diaminopimelate decarboxylase

Details for DVU1647 - Diaminopimelate decarboxylase

GO Terms: GO:0008836, GO:0009089, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1647

Tuberculist Genomic Region

DVUA0071 Glycosyl transferase, group 1/2 family protein

Details for DVUA0071 - Glycosyl transferase, group 1/2 family protein

GO Terms: GO:0009058, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0071

Tuberculist Genomic Region

DVU1648 Lipoprotein, putative

Details for DVU1648 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1648

Tuberculist Genomic Region

DVU0916 Redox-sensing transcriptional repressor Rex

Details for DVU0916 - Redox-sensing transcriptional repressor Rex

GO Terms: GO:0003677, GO:0050662, GO:0005737, GO:0045892, GO:0051775, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0916

Tuberculist Genomic Region

DVU1649 DNA mismatch repair protein MutS

Details for DVU1649 - DNA mismatch repair protein MutS

GO Terms: GO:0005524, GO:0003684, GO:0006298, GO:0030983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1649

Tuberculist Genomic Region

DVU1851 Peptidase, M23/M37 family

Details for DVU1851 - Peptidase, M23/M37 family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1851

Tuberculist Genomic Region

DVU1655 LL-diaminopimelate aminotransferase

Details for DVU1655 - LL-diaminopimelate aminotransferase

GO Terms: GO:0010285, GO:0033362, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1655

Tuberculist Genomic Region

Motif 1: e-value: 0.46 e-value: 120
Regulator Interaction Influence Weight Other Influences
Transcriptional regulator cII, putative
down-regulates -0.15
Uncharacterized protein
down-regulates -0.29
Transcriptional regulator, MerR family
up-regulates 0.31
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0005737 cytoplasm 86 0.66 3 0.0100
CC GO:0005622 intracellular 104 0.79 3 0.0180
CC GO:0044424 intracellular part 104 0.79 3 0.0180
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0008238 exopeptidase activity 4 0.03 1 0.0280
MF GO:0016597 amino acid binding 4 0.03 1 0.0280
MF GO:0008236 serine-type peptidase activity 5 0.04 1 0.0350
MF GO:0017171 serine hydrolase activity 5 0.04 1 0.0350
MF GO:0016831 carboxy-lyase activity 6 0.04 1 0.0420
MF GO:0031406 carboxylic acid binding 6 0.04 1 0.0420
MF GO:0043177 organic acid binding 6 0.04 1 0.0420
MF GO:0008483 transaminase activity 7 0.05 1 0.0480
MF GO:0016769 transferase activity, transferring nitro... 7 0.05 1 0.0480
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