Desulfovibrio vulgaris Hildenborough Module 20 Residual: 0.46 | Syntrophy Portal

×

Error message

Unable to create CTools CSS cache directory. Check the permissions on your files directory.
Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.46 Score: -62.6377 version: dvh_cmonkey_11_Mar_02

Members

DVU1542 Uncharacterized protein Details for DVU1542 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1542 Tuberculist Genomic Region	DVU2720 Uncharacterized protein Details for DVU2720 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2720 Tuberculist Genomic Region
DVU1543 ATP-dependent helicase HrpB Details for DVU1543 - ATP-dependent helicase HrpB GO Terms: GO:0005524, GO:0004386, GO:0003676 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1543 Tuberculist Genomic Region	DVU2721 Phage tail tape measure protein, TP901 family, putative Details for DVU2721 - Phage tail tape measure protein, TP901 family, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2721 Tuberculist Genomic Region
DVU1565 Uncharacterized protein Details for DVU1565 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1565 Tuberculist Genomic Region	DVU2722 Uncharacterized protein Details for DVU2722 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2722 Tuberculist Genomic Region
DVU2624 Uncharacterized protein Details for DVU2624 - Uncharacterized protein GO Terms: GO:0006323 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2624 Tuberculist Genomic Region	DVU2723 Tail protein, putative Details for DVU2723 - Tail protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2723 Tuberculist Genomic Region
DVU2646 1-aminocyclopropane-1-carboxylate deaminase Details for DVU2646 - 1-aminocyclopropane-1-carboxylate deaminase GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2646 Tuberculist Genomic Region	DVU2724 Phage baseplate assembly protein V, putative Details for DVU2724 - Phage baseplate assembly protein V, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2724 Tuberculist Genomic Region
DVU2647 Endoribonuclease, L-PSP family Details for DVU2647 - Endoribonuclease, L-PSP family GO Terms: GO:0019239 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2647 Tuberculist Genomic Region	DVU2727 Uncharacterized protein Details for DVU2727 - Uncharacterized protein GO Terms: GO:0009308, GO:0005507, GO:0048038 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2727 Tuberculist Genomic Region
DVU2702 Uncharacterized protein Details for DVU2702 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2702 Tuberculist Genomic Region	DVU2728 Tail protein, putative Details for DVU2728 - Tail protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2728 Tuberculist Genomic Region
DVU2703 Uncharacterized protein Details for DVU2703 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2703 Tuberculist Genomic Region	DVU2729 Tail protein, putative Details for DVU2729 - Tail protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2729 Tuberculist Genomic Region
DVU2719 Uncharacterized protein Details for DVU2719 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2719 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.003 Motif 2:

e-value: 1

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1063 Transcriptional regulatory protein	up-regulates	0.20	DVU1063
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.18	DVU1517
DVU1754 Uncharacterized protein	up-regulates	0.14	DVU1754
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.11	DVU2832
DVUA0151 DNA-binding protein, putative	up-regulates	0.17	DVUA0151

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0019239	deaminase activity	4	0.01	1	0.0093

Essentiality

Comments

Log in to post comments