Desulfovibrio vulgaris Hildenborough Module 47 Residual: 0.36 | Syntrophy Portal

×

Error message

Unable to create CTools CSS cache directory. Check the permissions on your files directory.
Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.36 Score: -81.8236 version: dvh_cmonkey_11_Mar_02

Members

DVU0016 Uncharacterized protein Details for DVU0016 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0016 Tuberculist Genomic Region	DVUA0056 Uncharacterized protein Details for DVUA0056 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0056 Tuberculist Genomic Region
DVU0545 Uncharacterized protein Details for DVU0545 - Uncharacterized protein GO Terms: GO:0006950 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0545 Tuberculist Genomic Region	DVU1712 Uncharacterized protein Details for DVU1712 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1712 Tuberculist Genomic Region
DVU2192 Uncharacterized protein Details for DVU2192 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2192 Tuberculist Genomic Region	DVU1716 Uncharacterized protein Details for DVU1716 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1716 Tuberculist Genomic Region
DVU2327 Uncharacterized protein Details for DVU2327 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2327 Tuberculist Genomic Region	DVU1754 Uncharacterized protein Details for DVU1754 - Uncharacterized protein GO Terms: GO:0003677, GO:0045892 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1754 Tuberculist Genomic Region
DVU2426 Uncharacterized protein Details for DVU2426 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2426 Tuberculist Genomic Region	DVU2278 Membrane protein, putative Details for DVU2278 - Membrane protein, putative GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2278 Tuberculist Genomic Region
DVUA0011 Nitrogenase molybdenum-iron protein beta chain Details for DVUA0011 - Nitrogenase molybdenum-iron protein beta chain GO Terms: GO:0018697, GO:0016612, GO:0009399, GO:0016163 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0011 Tuberculist Genomic Region	DVU2832 Transcriptional regulator cII, putative Details for DVU2832 - Transcriptional regulator cII, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2832 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 350 Motif 2:

e-value: 3200

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0529 Protein rrf2	up-regulates	0.24	DVU0529
DVU1063 Transcriptional regulatory protein	up-regulates	0.16	DVU1063
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.10	DVU1156
DVU1561 Molybdenum-binding protein, HTH domain	up-regulates	0.12	DVU1561
DVU2097 Transcriptional regulator, putative	down-regulates	-0.34	DVU2097
DVU2588 DNA-binding response regulator	up-regulates	0.15	DVU2588
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.24	DVU3142

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016730	oxidoreductase activity, acting on iron-...	5	0.01	1	0.0078

Essentiality

Comments

Log in to post comments