Desulfovibrio vulgaris Hildenborough Module 48 Residual: 0.44

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Residual: 0.44 Score: -38.8938 version: dvh_cmonkey_11_Mar_02
DVU0079 ZIP zinc transporter family protein

Details for DVU0079 - ZIP zinc transporter family protein

GO Terms: GO:0016020, GO:0046873

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0079

Tuberculist Genomic Region

DVU1814 Cytochrome c oxidase, subunit III, putative

Details for DVU1814 - Cytochrome c oxidase, subunit III, putative

GO Terms: GO:0019646, GO:0004129, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1814

Tuberculist Genomic Region

DVU0128 Membrane protein, putative

Details for DVU0128 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0128

Tuberculist Genomic Region

DVU2243 1,4-alpha-glucan branching enzyme GlgB

Details for DVU2243 - 1,4-alpha-glucan branching enzyme GlgB

GO Terms: GO:0003844, GO:0043169, GO:0005978, GO:0004553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2243

Tuberculist Genomic Region

DVU0327 Exopolysaccharide biosynthesis protein, putative

Details for DVU0327 - Exopolysaccharide biosynthesis protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0327

Tuberculist Genomic Region

DVU2409 Bacterial extracellular solute-binding proteins, family 3

Details for DVU2409 - Bacterial extracellular solute-binding proteins, family 3

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2409

Tuberculist Genomic Region

DVU0413 Potassium uptake protein, TrkH family

Details for DVU0413 - Potassium uptake protein, TrkH family

GO Terms: GO:0008324

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0413

Tuberculist Genomic Region

DVU2484 Cytochrome c family protein

Details for DVU2484 - Cytochrome c family protein

GO Terms: GO:0009055, GO:0020037

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2484

Tuberculist Genomic Region

DVU0612 STAS domain protein

Details for DVU0612 - STAS domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0612

Tuberculist Genomic Region

DVU2485 Membrane protein, putative

Details for DVU2485 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2485

Tuberculist Genomic Region

DVU1019 Conserved domain protein

Details for DVU1019 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1019

Tuberculist Genomic Region

DVU2762 Membrane protein, putative

Details for DVU2762 - Membrane protein, putative

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2762

Tuberculist Genomic Region

DVU1242 VacJ lipoprotein, putative

Details for DVU1242 - VacJ lipoprotein, putative

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1242

Tuberculist Genomic Region

DVU2787 Conserved domain protein

Details for DVU2787 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2787

Tuberculist Genomic Region

DVU1458 Chemotaxis protein CheZ, putative

Details for DVU1458 - Chemotaxis protein CheZ, putative

GO Terms: GO:0009288, GO:0003824, GO:0050920

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1458

Tuberculist Genomic Region

DVU3255 Transcriptional regulator, CopG family

Details for DVU3255 - Transcriptional regulator, CopG family

GO Terms: GO:0006355

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3255

Tuberculist Genomic Region

DVU1590 DNA repair protein radA

Details for DVU1590 - DNA repair protein radA

GO Terms: GO:0005524, GO:0006281, GO:0008094, GO:0003684, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1590

Tuberculist Genomic Region

DVU3261 Fumarate reductase, cytochrome b subunit

Details for DVU3261 - Fumarate reductase, cytochrome b subunit

GO Terms: GO:0046872, GO:0016627, GO:0006099

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3261

Tuberculist Genomic Region

DVU1611 Molybdopterin oxidoreductase domain protein

Details for DVU1611 - Molybdopterin oxidoreductase domain protein

GO Terms: GO:0051536, GO:0046872, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1611

Tuberculist Genomic Region

DVU3375 Cell division ATP-binding protein FtsE, putative

Details for DVU3375 - Cell division ATP-binding protein FtsE, putative

GO Terms: GO:0005524, GO:0016887, GO:0051301

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3375

Tuberculist Genomic Region

DVU1813 Uncharacterized protein

Details for DVU1813 - Uncharacterized protein

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1813

Tuberculist Genomic Region

DVU0441 Adenine deaminase

Details for DVU0441 - Adenine deaminase

GO Terms: GO:0006146, GO:0000034

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0441

Tuberculist Genomic Region

Motif 1: e-value: 170 e-value: 170
Regulator Interaction Influence Weight Other Influences
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.14
Transcriptional regulatory protein
down-regulates -0.15
Uncharacterized protein
down-regulates -0.11
Transcriptional regulator, putative
up-regulates 0.19
Transcriptional regulator, ArsR family
up-regulates 0.17
Transcriptional regulator, putative
up-regulates 0.11
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0019439 aromatic compound catabolic process 4 0.03 1 0.0323
BP GO:0044270 cellular nitrogen compound catabolic pro... 4 0.03 1 0.0323
BP GO:0046700 heterocycle catabolic process 4 0.03 1 0.0323
BP GO:1901361 organic cyclic compound catabolic proces... 4 0.03 1 0.0323
BP GO:0045333 cellular respiration 5 0.04 1 0.0402
BP GO:0015980 energy derivation by oxidation of organi... 6 0.05 1 0.0481
BP GO:0022900 electron transport chain 6 0.05 1 0.0481
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016758 transferase activity, transferring hexos... 3 0.02 1 0.0163
MF GO:0008324 cation transmembrane transporter activit... 7 0.04 1 0.0377
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