Desulfovibrio vulgaris Hildenborough Module 101 Residual: 0.33 | Syntrophy Portal

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Summary

Residual: 0.33 Score: -86.5701 version: dvh_cmonkey_11_Mar_02

Members

DVU1106 Uncharacterized protein Details for DVU1106 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1106 Tuberculist Genomic Region	DVU1132 Uncharacterized protein Details for DVU1132 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1132 Tuberculist Genomic Region
DVU1115 Uncharacterized protein Details for DVU1115 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1115 Tuberculist Genomic Region	DVU1133 Uncharacterized protein Details for DVU1133 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1133 Tuberculist Genomic Region
DVU1123 Conserved domain protein Details for DVU1123 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1123 Tuberculist Genomic Region	DVU1137 Uncharacterized protein Details for DVU1137 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1137 Tuberculist Genomic Region
DVU1124 Uncharacterized protein Details for DVU1124 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1124 Tuberculist Genomic Region	DVU1138 Uncharacterized protein Details for DVU1138 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1138 Tuberculist Genomic Region
DVU1125 Conserved domain protein Details for DVU1125 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1125 Tuberculist Genomic Region	DVU1140 Bacteriophage transposase A protein, putative Details for DVU1140 - Bacteriophage transposase A protein, putative GO Terms: GO:0003677, GO:0015074 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1140 Tuberculist Genomic Region
DVU1130 DNA-binding protein Details for DVU1130 - DNA-binding protein GO Terms: GO:0003677 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1130 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 4500 Motif 2:

e-value: 5600

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
[field_regulator_taxonomy_regulat_1]	up-regulates	0.32	Co-culture Ancestor
DVU0569 Sigma-54 dependent transcriptional regulator	down-regulates	-0.13	DVU0569
DVU0679 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.11	DVU0679
DVU0749 DNA-binding response regulator	up-regulates	0.12	DVU0749
DVU1063 Transcriptional regulatory protein	up-regulates	0.15	DVU1063
DVU2097 Transcriptional regulator, putative	down-regulates	-0.19	DVU2097
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.27	DVU2114
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.21	DVU2832
[field_regulator_taxonomy_regulat_1]	up-regulates	0.19	Formate
[field_regulator_taxonomy_regulat_1]	down-regulates	-0.13	Megaplasmid minus

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0003677	DNA binding	159	0.25	2	0.0150
MF	GO:0003676	nucleic acid binding	222	0.35	2	0.0300

Essentiality

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