Desulfovibrio vulgaris Hildenborough Module 189 Residual: 0.34

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Summary

Residual: 0.34 Score: -81.3242 version: dvh_cmonkey_11_Mar_02

Members

DVU0533 Protein DVU_0533

Details for DVU0533 - Protein DVU_0533

GO Terms: GO:0016021, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0533

Tuberculist Genomic Region

DVU0531 Protein DVU_0531

Details for DVU0531 - Protein DVU_0531

GO Terms: GO:0051539, GO:0005737, GO:0046872, GO:0055114

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0531

Tuberculist Genomic Region

DVU0534 Protein DVU_0534

Details for DVU0534 - Protein DVU_0534

GO Terms: GO:0016021, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0534

Tuberculist Genomic Region

DVU0532 Protein DVU_0532

Details for DVU0532 - Protein DVU_0532

GO Terms: GO:0016021, GO:0046872, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0532

Tuberculist Genomic Region

DVU0588 Formate dehydrogenase, beta subunit, putative

Details for DVU0588 - Formate dehydrogenase, beta subunit, putative

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0588

Tuberculist Genomic Region

DVU0535 Protein DVU_0535

Details for DVU0535 - Protein DVU_0535

GO Terms: GO:0051539, GO:0016021, GO:0046872, GO:0055114, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0535

Tuberculist Genomic Region

DVU0596 DNA-binding response regulator LytR

Details for DVU0596 - DNA-binding response regulator LytR

GO Terms: GO:0003677, GO:0000160, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0596

Tuberculist Genomic Region

DVU0536 High-molecular-weight cytochrome c

Details for DVU0536 - High-molecular-weight cytochrome c

GO Terms: GO:0009055, GO:0020037, GO:0046872, GO:0055114, GO:0042597

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0536

Tuberculist Genomic Region

DVU0597 Histidine kinase

Details for DVU0597 - Histidine kinase

GO Terms: GO:0071555, GO:0016021, GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0597

Tuberculist Genomic Region

DVU0586 Uncharacterized protein

Details for DVU0586 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0586

Tuberculist Genomic Region

DVU2294 FemAB family protein

Details for DVU2294 - FemAB family protein

GO Terms: GO:0009252, GO:0016755

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2294

Tuberculist Genomic Region

DVU0598 Carbon starvation protein A, putative

Details for DVU0598 - Carbon starvation protein A, putative

GO Terms: GO:0009267, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0598

Tuberculist Genomic Region

DVU0529 Protein rrf2

Details for DVU0529 - Protein rrf2

GO Terms: GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0529

Tuberculist Genomic Region

DVU0599 Carbon starvation protein A, putative

Details for DVU0599 - Carbon starvation protein A, putative

GO Terms: GO:0009267, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0599

Tuberculist Genomic Region

DVU0530 Protein rrf1

Details for DVU0530 - Protein rrf1

GO Terms: GO:0000160, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0530

Tuberculist Genomic Region

Displaying 1 - 15 of 15

Motifs

Motif 1: e-value: 1700 e-value: 3200

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1402

Transcriptional regulator, LysR family
 up-regulates 0.11

DVU1402

DVU1730

DNA-binding protein
 up-regulates 0.11

DVU1730

DVU1754

Uncharacterized protein
 up-regulates 0.10

DVU1754

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009991 response to extracellular stimulus 3 0.04 2 0.0004
BP GO:0031668 cellular response to extracellular stimu... 3 0.04 2 0.0004
BP GO:0071496 cellular response to external stimulus 3 0.04 2 0.0004
BP GO:0071554 cell wall organization or biogenesis 7 0.09 2 0.0030
BP GO:0033554 cellular response to stress 8 0.11 2 0.0040
BP GO:0007154 cell communication 39 0.53 3 0.0094
BP GO:0051716 cellular response to stimulus 44 0.60 3 0.0134
BP GO:0006950 response to stress 22 0.30 2 0.0305
BP GO:0009605 response to external stimulus 23 0.31 2 0.0332
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0051536 iron-sulfur cluster binding 110 0.52 3 0.0100
MF GO:0051540 metal cluster binding 110 0.52 3 0.0100
MF GO:0051539 4 iron, 4 sulfur cluster binding 61 0.29 2 0.0300

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