Desulfovibrio vulgaris Hildenborough Module 286 Residual: 0.47

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Summary

Residual: 0.47 Score: -42.6172 version: dvh_cmonkey_11_Mar_02

Members

DVU0043 Flagellar biosynthetic protein FliQ

Details for DVU0043 - Flagellar biosynthetic protein FliQ

GO Terms: GO:0044780, GO:0016021, GO:0009306

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0043

Tuberculist Genomic Region

DVU1805 GGDEF domain protein

Details for DVU1805 - GGDEF domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1805

Tuberculist Genomic Region

DVU0044 Flagellar biosynthetic protein fliP

Details for DVU0044 - Flagellar biosynthetic protein fliP

GO Terms: GO:0016021, GO:0009306

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0044

Tuberculist Genomic Region

DVU1854 Uncharacterized protein

Details for DVU1854 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1854

Tuberculist Genomic Region

DVU0045 Flagellar biosynthesis protein, FliO, putative

Details for DVU0045 - Flagellar biosynthesis protein, FliO, putative

GO Terms: GO:0044781, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0045

Tuberculist Genomic Region

DVU1880 Uncharacterized protein

Details for DVU1880 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1880

Tuberculist Genomic Region

DVU0307 Flagella basal body rod domain protein

Details for DVU0307 - Flagella basal body rod domain protein

GO Terms: GO:0030694, GO:0071973

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0307

Tuberculist Genomic Region

DVU1961 Chemotaxis protein CheW

Details for DVU1961 - Chemotaxis protein CheW

GO Terms: GO:0006935, GO:0005622, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1961

Tuberculist Genomic Region

DVU0317 Uncharacterized protein

Details for DVU0317 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0317

Tuberculist Genomic Region

DVU1963 Uncharacterized protein

Details for DVU1963 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1963

Tuberculist Genomic Region

DVU0318 TPR domain protein

Details for DVU0318 - TPR domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0318

Tuberculist Genomic Region

DVU2065 Uncharacterized protein

Details for DVU2065 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2065

Tuberculist Genomic Region

DVU0320 Uncharacterized protein

Details for DVU0320 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0320

Tuberculist Genomic Region

DVU2444 Flagellin

Details for DVU2444 - Flagellin

GO Terms: GO:0009420, GO:0071973, GO:0005198

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2444

Tuberculist Genomic Region

DVU0410 Uncharacterized protein

Details for DVU0410 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0410

Tuberculist Genomic Region

DVU2445 Uncharacterized protein

Details for DVU2445 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2445

Tuberculist Genomic Region

DVU0518 Uncharacterized protein

Details for DVU0518 - Uncharacterized protein

GO Terms: GO:0044780

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0518

Tuberculist Genomic Region

DVU2991 Uncharacterized protein

Details for DVU2991 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2991

Tuberculist Genomic Region

DVU1441 Flagellin

Details for DVU1441 - Flagellin

GO Terms: GO:0009420, GO:0071973, GO:0005198

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1441

Tuberculist Genomic Region

DVU3002 Conserved domain protein

Details for DVU3002 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3002

Tuberculist Genomic Region

DVU1442 Flagellin FlaG, putative

Details for DVU1442 - Flagellin FlaG, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1442

Tuberculist Genomic Region

DVU3232 Flagellar biosynthetic protein FlhA

Details for DVU3232 - Flagellar biosynthetic protein FlhA

GO Terms: GO:0044780, GO:0016021, GO:0009306

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3232

Tuberculist Genomic Region

DVU1443 Flagellar hook protein FlgE

Details for DVU1443 - Flagellar hook protein FlgE

GO Terms: GO:0030694, GO:0071973

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1443

Tuberculist Genomic Region

DVU3234 Flagellar biosynthetic protein fliR

Details for DVU3234 - Flagellar biosynthetic protein fliR

GO Terms: GO:0009288, GO:0044780, GO:0016021, GO:0006605

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3234

Tuberculist Genomic Region

DVU1444 Basal-body rod modification protein FlgD

Details for DVU1444 - Basal-body rod modification protein FlgD

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1444

Tuberculist Genomic Region

Displaying 1 - 25 of 25

Motifs

Motif 1: e-value: 52 e-value: 0.31

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0030

Transcriptional regulator, GntR family
 down-regulates -0.12

DVU0030

DVU0813

Heat-inducible transcription repressor HrcA
 up-regulates 0.11

DVU0813

DVU2086

Transcriptional regulator, GntR family
 down-regulates -0.12

DVU2086

DVU3305

Sigma-54 dependent transcriptional regulator/response regulator
 down-regulates -0.10

DVU3305

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0016043 cellular component organization 28 0.38 4 0.0001
BP GO:0071840 cellular component organization or bioge... 31 0.42 4 0.0002
BP GO:0022607 cellular component assembly 18 0.24 3 0.0009
BP GO:0044085 cellular component biogenesis 21 0.28 3 0.0015
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0043226 organelle 48 0.73 5 0.0001
CC GO:0043228 non-membrane-bounded organelle 48 0.73 5 0.0001
CC GO:0044422 organelle part 26 0.40 4 0.0002
CC GO:0009420 bacterial-type flagellum filament 3 0.05 2 0.0006
CC GO:0030694 bacterial-type flagellum basal body, rod 6 0.09 2 0.0028
CC GO:0009425 bacterial-type flagellum basal body 13 0.20 2 0.0141
CC GO:0005623 cell 145 2.21 5 0.0275
CC GO:0044464 cell part 145 2.21 5 0.0275
CC GO:0005622 intracellular 104 1.59 4 0.0446
CC GO:0044424 intracellular part 104 1.59 4 0.0446

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