Desulfovibrio vulgaris Hildenborough Module 328 Residual: 0.34

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Residual: 0.34 Score: -96.4635 version: dvh_cmonkey_11_Mar_02
DVUA0015 Nitrogenase iron protein

Details for DVUA0015 - Nitrogenase iron protein

GO Terms: GO:0051539, GO:0005524, GO:0018697, GO:0046872, GO:0016612, GO:0009399, GO:0016163

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0015

Tuberculist Genomic Region

DVUA0039 Chain length determinant family protein

Details for DVUA0039 - Chain length determinant family protein

GO Terms: GO:0009103, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0039

Tuberculist Genomic Region

DVUA0051 Glycosyl transferase, group 1 family protein

Details for DVUA0051 - Glycosyl transferase, group 1 family protein

GO Terms: GO:0009058, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0051

Tuberculist Genomic Region

DVUA0040 Polysaccharide biosynthesis protein, putative

Details for DVUA0040 - Polysaccharide biosynthesis protein, putative

GO Terms: GO:0045226

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0040

Tuberculist Genomic Region

DVU0215 Tail protein, putative

Details for DVU0215 - Tail protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0215

Tuberculist Genomic Region

DVUA0042 Lipoprotein, putative

Details for DVUA0042 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0042

Tuberculist Genomic Region

DVU2731 Tail fiber assembly protein, putative

Details for DVU2731 - Tail fiber assembly protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2731

Tuberculist Genomic Region

DVUA0065 Histidine kinase

Details for DVUA0065 - Histidine kinase

GO Terms: GO:0005524, GO:0016020, GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0065

Tuberculist Genomic Region

DVUA0013 Nitrogen regulatory protein P-II

Details for DVUA0013 - Nitrogen regulatory protein P-II

GO Terms: GO:0030234, GO:0006808, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0013

Tuberculist Genomic Region

Motif 1: e-value: 370 e-value: 1200
Regulator Interaction Influence Weight Other Influences
Transcriptional regulator, MarR family
up-regulates 0.28
Sigma-54 dependent DNA-binding response regulator
up-regulates 0.46
Transcriptional regulatory protein
up-regulates 0.15
Sigma-54 dependent transcriptional regulator/response regulator
down-regulates -0.11
Transcriptional regulator cII, putative
up-regulates 0.11
Transcriptional regulator, MerR family
down-regulates -0.17
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0000271 polysaccharide biosynthetic process 7 0.06 2 0.0009
BP GO:0005976 polysaccharide metabolic process 7 0.06 2 0.0009
BP GO:0033692 cellular polysaccharide biosynthetic pro... 7 0.06 2 0.0009
BP GO:0034637 cellular carbohydrate biosynthetic proce... 7 0.06 2 0.0009
BP GO:0044264 cellular polysaccharide metabolic proces... 7 0.06 2 0.0009
BP GO:0016051 carbohydrate biosynthetic process 11 0.09 2 0.0024
BP GO:0044262 cellular carbohydrate metabolic process 11 0.09 2 0.0024
BP GO:0044723 single-organism carbohydrate metabolic p... 16 0.13 2 0.0052
BP GO:0009059 macromolecule biosynthetic process 19 0.15 2 0.0073
BP GO:0034645 cellular macromolecule biosynthetic proc... 19 0.15 2 0.0073
BP GO:0005975 carbohydrate metabolic process 33 0.27 2 0.0220
BP GO:0008653 lipopolysaccharide metabolic process 3 0.02 1 0.0243
BP GO:0009103 lipopolysaccharide biosynthetic process 3 0.02 1 0.0243
BP GO:0009058 biosynthetic process 133 1.08 3 0.0462
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0030234 enzyme regulator activity 6 0.01 1 0.0140
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