Methanococcus maripaludis S2 Module 30 Residual: 0.30

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.30 Score: -15.5052 version: mmp_cmonkey_11_Oct_11

Members

MMP0209 Conserved hypothetical protein (NCBI)

Details for MMP0209 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0209

Tuberculist Genomic Region

MMP0764 hypothetical protein (NCBI)

Details for MMP0764 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0764

Tuberculist Genomic Region

MMP0303 rubredoxin (NCBI)

Details for MMP0303 - rubredoxin (NCBI)

GO Terms: GO:0006118, GO:0046872, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0303

Tuberculist Genomic Region

MMP0765 hypothetical (NCBI)

Details for MMP0765 - hypothetical (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0765

Tuberculist Genomic Region

MMP0332 conserved hypothetical protein (NCBI)

Details for MMP0332 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006259, GO:0005694, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0332

Tuberculist Genomic Region

MMP0770 probable ABC transporter (NCBI)

Details for MMP0770 - probable ABC transporter (NCBI)

GO Terms: GO:0006810, GO:0030288, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0770

Tuberculist Genomic Region

MMP0416 conserved hypothetical protein (NCBI)

Details for MMP0416 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0416

Tuberculist Genomic Region

MMP0798 hypothetical protein (NCBI)

Details for MMP0798 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0798

Tuberculist Genomic Region

MMP0445 hypothetical protein (NCBI)

Details for MMP0445 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0445

Tuberculist Genomic Region

MMP0827 hypothetical protein (NCBI)

Details for MMP0827 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0827

Tuberculist Genomic Region

MMP0532 conserved hypothetical protein (NCBI)

Details for MMP0532 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0532

Tuberculist Genomic Region

MMP0846 hypothetical protein (NCBI)

Details for MMP0846 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0846

Tuberculist Genomic Region

MMP0601 hypothetical protein (NCBI)

Details for MMP0601 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0601

Tuberculist Genomic Region

MMP0915 nucleoside triphosphate: 5'-deoxyadenosylcobinamide phosphate nucleotidyltransferase (NCBI)

Details for MMP0915 - nucleoside triphosphate: 5'-deoxyadenosylcobinamide phosphate nucleotidyltransferase (NCBI)

GO Terms: GO:0009058, GO:0016779

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0915

Tuberculist Genomic Region

MMP0724 hypothetical protein (NCBI)

Details for MMP0724 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0724

Tuberculist Genomic Region

MMP0916 conserved hypothetical protein (NCBI)

Details for MMP0916 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0916

Tuberculist Genomic Region

MMP0726 hypothetical (NCBI)

Details for MMP0726 - hypothetical (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0726

Tuberculist Genomic Region

MMP0944 hypothetical protein (NCBI)

Details for MMP0944 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0944

Tuberculist Genomic Region

MMP0734 hypothetical protein (NCBI)

Details for MMP0734 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0734

Tuberculist Genomic Region

MMP0972 hypothetical protein (NCBI)

Details for MMP0972 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0972

Tuberculist Genomic Region

MMP0754 hypothetical protein (NCBI)

Details for MMP0754 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0754

Tuberculist Genomic Region

MMP1225 amino acid ABC-type transporter related protein (NCBI)

Details for MMP1225 - amino acid ABC-type transporter related protein (NCBI)

GO Terms: GO:0006810, GO:0030288, GO:0016020, GO:0005234, GO:0005215, GO:0004970

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1225

Tuberculist Genomic Region

MMP0755 ATP/GTP-binding site motif A (P-loop) (NCBI)

Details for MMP0755 - ATP/GTP-binding site motif A (P-loop) (NCBI)

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0755

Tuberculist Genomic Region

MMP1632 Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 (NCBI)

Details for MMP1632 - Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 (NCBI)

GO Terms: GO:0006810, GO:0030288, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1632

Tuberculist Genomic Region

Displaying 1 - 24 of 24

Motifs

Motif 1: e-value: 0.0000000012 e-value: 58000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP1304

Response regulator receiver (NCBI)
 up-regulates 0.29

MMP1304

MMP1303

Sensory transduction histidine kinase (NCBI)
 up-regulates 0.28

MMP1303

MMP0257

TATA-binding protein (TBP) (NCBI)

MMP1304

Response regulator receiver (NCBI)
 up-regulates 0.22

MMP0257

MMP1304

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)

MMP0257

TATA-binding protein (TBP) (NCBI)
 up-regulates 0.19

MMP0052

MMP0257

MMP0033

LysR family member (NCBI)
 down-regulates -0.14

MMP0033

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005215 transporter activity 32 0.25 2 0.0220
MF GO:0005506 iron ion binding 4 0.03 1 0.0310

Comments

Log in to post comments