Methanococcus maripaludis S2 Module 37 Residual: 0.21 | Syntrophy Portal

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Summary

Residual: 0.21 Score: -22.3973 version: mmp_cmonkey_11_Oct_11

Members

MMP0129 Conserved Hypothetical Protein (NCBI) Details for MMP0129 - Conserved Hypothetical Protein (NCBI) GO Terms: GO:0006260, GO:0003677, GO:0003887 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0129 Tuberculist Genomic Region	MMP1478 Cobyrinic acid a,c-diamide synthase:Cobyrinic acid a,c-diamide synthase CbiA (NCBI) Details for MMP1478 - Cobyrinic acid a,c-diamide synthase:Cobyrinic acid a,c-diamide synthase CbiA (NCBI) GO Terms: GO:0009236, GO:0043802, GO:0042242 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1478 Tuberculist Genomic Region
MMP0672 Binding-protein-dependent transport systems inner membrane component:Ketopantoate reductase ApbA/PanE (NCBI) Details for MMP0672 - Binding-protein-dependent transport systems inner membrane component:Ketopantoate reductase ApbA/PanE (NCBI) GO Terms: GO:0006206, GO:0008677, GO:0050661 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0672 Tuberculist Genomic Region	MMP1528 Prephenate dehydratase (NCBI) Details for MMP1528 - Prephenate dehydratase (NCBI) GO Terms: GO:0009094, GO:0005506, GO:0004664, GO:0004497 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1528 Tuberculist Genomic Region
MMP0821 coenzyme F420-non-reducing hydrogenase subunit delta (NCBI) Details for MMP0821 - coenzyme F420-non-reducing hydrogenase subunit delta (NCBI) GO Terms: GO:0009228, GO:0015948 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0821 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.071 Motif 2:

e-value: 730

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
MMP1015 Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)	up-regulates	0.42	MMP1015
MMP0052 Conserved Hypothetical protein with 2 CBS domains (NCBI) MMP0257 TATA-binding protein (TBP) (NCBI)	up-regulates	0.41	MMP0052 MMP0257

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0009073	aromatic amino acid family biosynthetic ...	3	0.05	1	0.0460
BP	GO:0009072	aromatic amino acid family metabolic pro...	3	0.05	1	0.0460

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016614	oxidoreductase activity, acting on CH-OH...	7	0.02	1	0.0180
MF	GO:0016616	oxidoreductase activity, acting on the C...	7	0.02	1	0.0180

Essentiality

Comments

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