Methanococcus maripaludis S2 Module 46 Residual: 0.45

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Summary

Residual: 0.45 Score: -9.81202 version: mmp_cmonkey_11_Oct_11

Members

MMP0234 conserved hypothetical protein (NCBI)

Details for MMP0234 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0234

Tuberculist Genomic Region

MMP0374 conserved hypothetical protein (NCBI)

Details for MMP0374 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0374

Tuberculist Genomic Region

MMP0251 proteasome, subunit alpha (NCBI)

Details for MMP0251 - proteasome, subunit alpha (NCBI)

GO Terms: GO:0006511, GO:0005839, GO:0004175, GO:0004298, GO:0004299

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0251

Tuberculist Genomic Region

MMP0394 Uroporphyrinogen III synthase (NCBI)

Details for MMP0394 - Uroporphyrinogen III synthase (NCBI)

GO Terms: GO:0033014, GO:0004852

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0394

Tuberculist Genomic Region

MMP0373 hypothetical protein (NCBI)

Details for MMP0373 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0373

Tuberculist Genomic Region

MMP0395 hypothetical protein (NCBI)

Details for MMP0395 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0395

Tuberculist Genomic Region

MMP0387 microsomal signal peptidase 21 KD subunit (NCBI)

Details for MMP0387 - microsomal signal peptidase 21 KD subunit (NCBI)

GO Terms: GO:0006465, GO:0006508, GO:0016020, GO:0009004, GO:0008233

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0387

Tuberculist Genomic Region

MMP0411 Sulfopyruvate decarboxylase subunit alpha (NCBI)

Details for MMP0411 - Sulfopyruvate decarboxylase subunit alpha (NCBI)

GO Terms: GO:0006118, GO:0016491, GO:0030976, GO:0050545

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0411

Tuberculist Genomic Region

MMP0516 molybdate transporter subunit (NCBI)

Details for MMP0516 - molybdate transporter subunit (NCBI)

GO Terms: GO:0009435, GO:0004514

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0516

Tuberculist Genomic Region

MMP0427 Replication factor C, small subunit (NCBI)

Details for MMP0427 - Replication factor C, small subunit (NCBI)

GO Terms: GO:0006260, GO:0006310, GO:0005663, GO:0009360, GO:0005634, GO:0009378, GO:0005524, GO:0003887, GO:0003689

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0427

Tuberculist Genomic Region

MMP0656 conserved hypothetical protein (NCBI)

Details for MMP0656 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0656

Tuberculist Genomic Region

MMP1140 ferredoxin (NCBI)

Details for MMP1140 - ferredoxin (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1140

Tuberculist Genomic Region

MMP0658 MoaA/nifB/pqqE family (NCBI)

Details for MMP0658 - MoaA/nifB/pqqE family (NCBI)

GO Terms: GO:0051536, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0658

Tuberculist Genomic Region

MMP1168 ABC transporter ATP-binding protein (NCBI)

Details for MMP1168 - ABC transporter ATP-binding protein (NCBI)

GO Terms: GO:0006810, GO:0005524, GO:0003924, GO:0016887, GO:0005525

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1168

Tuberculist Genomic Region

MMP0729 excinuclease ABC subunit A (NCBI)

Details for MMP0729 - excinuclease ABC subunit A (NCBI)

GO Terms: GO:0006289, GO:0009380, GO:0005524, GO:0009381, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0729

Tuberculist Genomic Region

MMP1169 conserved hypothetical protein (NCBI)

Details for MMP1169 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016226, GO:0005515

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1169

Tuberculist Genomic Region

MMP0939 Conserved hypothetical protein (NCBI)

Details for MMP0939 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0008967

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0939

Tuberculist Genomic Region

MMP1185 Hydrogen uptake protein:Hydrogenase maturation protease HycI (NCBI)

Details for MMP1185 - Hydrogen uptake protein:Hydrogenase maturation protease HycI (NCBI)

GO Terms: GO:0008047, GO:0008233

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1185

Tuberculist Genomic Region

MMP1221 SAM (and some other nucleotide) binding motif (NCBI)

Details for MMP1221 - SAM (and some other nucleotide) binding motif (NCBI)

GO Terms: GO:0006464, GO:0009236, GO:0008610, GO:0004719, GO:0046025, GO:0008825, GO:0008276

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1221

Tuberculist Genomic Region

MMP1197 transport permease protein (NCBI)

Details for MMP1197 - transport permease protein (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1197

Tuberculist Genomic Region

MMP1390 conserved hypothetical archaeal protein (NCBI)

Details for MMP1390 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1390

Tuberculist Genomic Region

MMP1217 conserved hypothetical archaeal protein (NCBI)

Details for MMP1217 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1217

Tuberculist Genomic Region

MMP1477 Cobyrinic acid a,c-diamide synthase (NCBI)

Details for MMP1477 - Cobyrinic acid a,c-diamide synthase (NCBI)

GO Terms: GO:0009236, GO:0043802, GO:0042242

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1477

Tuberculist Genomic Region

MMP1218 conserved hypothetical protein (NCBI)

Details for MMP1218 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1218

Tuberculist Genomic Region

MMP0176 CDC48 cell division cycle protein family member (NCBI)

Details for MMP0176 - CDC48 cell division cycle protein family member (NCBI)

GO Terms: GO:0001906, GO:0006310, GO:0006281, GO:0005634, GO:0005524, GO:0009378, GO:0017111

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0176

Tuberculist Genomic Region

MMP0001 conserved archaeal protein (NCBI)

Details for MMP0001 - conserved archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0001

Tuberculist Genomic Region

MMP0252 hypothetical protein (NCBI)

Details for MMP0252 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0252

Tuberculist Genomic Region

MMP0002 L-seryl-tRNA selenium transferase related protein (NCBI)

Details for MMP0002 - L-seryl-tRNA selenium transferase related protein (NCBI)

GO Terms: GO:0001514, GO:0009058, GO:0005737, GO:0016769, GO:0004125, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0002

Tuberculist Genomic Region

MMP0363 methanol dehydrogenase regulatory protein related protein (NCBI)

Details for MMP0363 - methanol dehydrogenase regulatory protein related protein (NCBI)

GO Terms: GO:0006270, GO:0003677, GO:0016887, GO:0005524, GO:0008094

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0363

Tuberculist Genomic Region

Displaying 1 - 29 of 29

Motifs

Motif 1: e-value: 800 e-value: 1100

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0568

transcriptional regulator related protein (NCBI)

MMP1304

Response regulator receiver (NCBI)
 down-regulates -0.26

MMP0568

MMP1304

MMP0086

LuxR family member (NCBI)

H2

 up-regulates 0.16

MMP0086

H2

MMP0460

Conserved Hypothetical Protein (NCBI)

H2

 up-regulates 0.15

MMP0460

H2

MMP0033

LysR family member (NCBI)

MMP1304

Response regulator receiver (NCBI)
 down-regulates -0.15

MMP0033

MMP1304

MMP1304

Response regulator receiver (NCBI)

H2

 down-regulates -0.14

MMP1304

H2

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)

MMP1303

Sensory transduction histidine kinase (NCBI)
 down-regulates -0.11

MMP1023

MMP1303

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0032559 adenyl ribonucleotide binding 149 2.12 5 0.0430
MF GO:0005524 ATP binding 147 2.09 5 0.0400
MF GO:0030554 adenyl nucleotide binding 149 2.12 5 0.0430

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