Methanococcus maripaludis S2 Module 49 Residual: 0.49

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Summary

Residual: 0.49 Score: -11.1059 version: mmp_cmonkey_11_Oct_11

Members

MMP0020 conserved hypothetical protein (NCBI)

Details for MMP0020 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006355, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0020

Tuberculist Genomic Region

MMP0742 conserved hypothetical protein (NCBI)

Details for MMP0742 - conserved hypothetical protein (NCBI)

GO Terms: GO:0000074

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0742

Tuberculist Genomic Region

MMP0063 Acetylglutamate kinase (NCBI)

Details for MMP0063 - Acetylglutamate kinase (NCBI)

GO Terms: GO:0006561, GO:0006526, GO:0005737, GO:0004349, GO:0003991

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0063

Tuberculist Genomic Region

MMP1603 ferredoxin (NCBI)

Details for MMP1603 - ferredoxin (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1603

Tuberculist Genomic Region

MMP0084 conserved hypothetical protein (NCBI)

Details for MMP0084 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0084

Tuberculist Genomic Region

MMP0036 Transcription factor E (NCBI)

Details for MMP0036 - Transcription factor E (NCBI)

GO Terms: GO:0006367, GO:0005673, GO:0003702

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0036

Tuberculist Genomic Region

MMP0268 tRNA pseudouridine synthase Related (NCBI)

Details for MMP0268 - tRNA pseudouridine synthase Related (NCBI)

GO Terms: GO:0001522, GO:0003723, GO:0004730, GO:0016439

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0268

Tuberculist Genomic Region

MMP0239 conserved hypothetical archaeal protein (NCBI)

Details for MMP0239 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0239

Tuberculist Genomic Region

MMP0277 TraB family (NCBI)

Details for MMP0277 - TraB family (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0277

Tuberculist Genomic Region

MMP0307 conserved hypothetical archaeal protein (NCBI)

Details for MMP0307 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0307

Tuberculist Genomic Region

MMP0279 beta-ribofuranosylaminobenzene 5'-phosphate synthase (NCBI)

Details for MMP0279 - beta-ribofuranosylaminobenzene 5'-phosphate synthase (NCBI)

GO Terms: GO:0016310, GO:0005524, GO:0016301

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0279

Tuberculist Genomic Region

MMP0725 putative integral membrane protein (NCBI)

Details for MMP0725 - putative integral membrane protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0725

Tuberculist Genomic Region

MMP0302 hypothetical protein (NCBI)

Details for MMP0302 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0302

Tuberculist Genomic Region

MMP0902 Protein of unknown function DUF126 (NCBI)

Details for MMP0902 - Protein of unknown function DUF126 (NCBI)

GO Terms: GO:0016310, GO:0016772

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0902

Tuberculist Genomic Region

MMP0562 hypothetical protein (NCBI)

Details for MMP0562 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0562

Tuberculist Genomic Region

MMP1218 conserved hypothetical protein (NCBI)

Details for MMP1218 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1218

Tuberculist Genomic Region

MMP0643 conserved hypothetical protein (NCBI)

Details for MMP0643 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0643

Tuberculist Genomic Region

MMP1235 Molybdopterin biosynthesis MoaE (NCBI)

Details for MMP1235 - Molybdopterin biosynthesis MoaE (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1235

Tuberculist Genomic Region

MMP0727 excinuclease ABC subunit B (NCBI)

Details for MMP0727 - excinuclease ABC subunit B (NCBI)

GO Terms: GO:0006289, GO:0009380, GO:0005737, GO:0003677, GO:0004386, GO:0005524, GO:0009381

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0727

Tuberculist Genomic Region

MMP1282 Conseved hypothetical protein NTP-binding (NCBI)

Details for MMP1282 - Conseved hypothetical protein NTP-binding (NCBI)

GO Terms: GO:0019205

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1282

Tuberculist Genomic Region

MMP0918 Asparagine synthetase (glutamine-hydrolyzing) (NCBI)

Details for MMP0918 - Asparagine synthetase (glutamine-hydrolyzing) (NCBI)

GO Terms: GO:0006529, GO:0004066

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0918

Tuberculist Genomic Region

MMP1283 conserved hypothetical archaeal protein (NCBI)

Details for MMP1283 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1283

Tuberculist Genomic Region

MMP1290 conserved hypothetical protein (NCBI)

Details for MMP1290 - conserved hypothetical protein (NCBI)

GO Terms: GO:0015684, GO:0005975, GO:0005622, GO:0016021, GO:0009276, GO:0005525, GO:0015093, GO:0004553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1290

Tuberculist Genomic Region

MMP1346 Basic helix-loop-helix dimerization domain bHLH (NCBI)

Details for MMP1346 - Basic helix-loop-helix dimerization domain bHLH (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1346

Tuberculist Genomic Region

MMP1343 conserved hypothetical protein (NCBI)

Details for MMP1343 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1343

Tuberculist Genomic Region

MMP1372 Phosphoglucomutase/phosphomannomutase (NCBI)

Details for MMP1372 - Phosphoglucomutase/phosphomannomutase (NCBI)

GO Terms: GO:0005975, GO:0004615

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1372

Tuberculist Genomic Region

MMP1345 undecaprenyl pyrophospahte synthetase related protein (Di-trans-poly-cis-decaprenylcistransferase) (NCBI)

Details for MMP1345 - undecaprenyl pyrophospahte synthetase related protein (Di-trans-poly-cis-decaprenylcistransferase) (NCBI)

GO Terms: GO:0008152, GO:0008834

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1345

Tuberculist Genomic Region

MMP1551 signal recognition particle protein SRP54 (NCBI)

Details for MMP1551 - signal recognition particle protein SRP54 (NCBI)

GO Terms: GO:0006614, GO:0048500, GO:0016020, GO:0008312, GO:0017111, GO:0005525

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1551

Tuberculist Genomic Region

MMP1430 putative TRK system cation (K+) uptake protein (NCBI)

Details for MMP1430 - putative TRK system cation (K+) uptake protein (NCBI)

GO Terms: GO:0006812, GO:0008324

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1430

Tuberculist Genomic Region

MMP1606 Flavoprotein:DNA/pantothenate metabolism flavoprotein (NCBI)

Details for MMP1606 - Flavoprotein:DNA/pantothenate metabolism flavoprotein (NCBI)

GO Terms: GO:0004633, GO:0004632

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1606

Tuberculist Genomic Region

MMP1431 2-phosphoglycerate kinase (NCBI)

Details for MMP1431 - 2-phosphoglycerate kinase (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1431

Tuberculist Genomic Region

MMP1607 Protein of unknown function DUF99 (NCBI)

Details for MMP1607 - Protein of unknown function DUF99 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1607

Tuberculist Genomic Region

Displaying 1 - 32 of 32

Motifs

Motif 1: e-value: 1.2 e-value: 19

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

H2

 down-regulates -0.24

H2

MMP0460

Conserved Hypothetical Protein (NCBI)
 up-regulates 0.13

MMP0460

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0043167 ion binding 220 4.27 9 0.0099
MF GO:0005488 binding 431 8.36 13 0.0117
MF GO:0032553 ribonucleotide binding 181 3.51 7 0.0394
MF GO:0097367 carbohydrate derivative binding 182 3.53 7 0.0405

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