Methanococcus maripaludis S2 Module 54 Residual: 0.25

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Summary

Residual: 0.25 Score: -18.4052 version: mmp_cmonkey_11_Oct_11

Members

MMP0027 putative potassium channel protein (NCBI)

Details for MMP0027 - putative potassium channel protein (NCBI)

GO Terms: GO:0006813, GO:0008324

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0027

Tuberculist Genomic Region

MMP1552 Flavoprotein:Phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (NCBI)

Details for MMP1552 - Flavoprotein:Phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (NCBI)

GO Terms: GO:0016831

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1552

Tuberculist Genomic Region

MMP0070 tungsten containing formylmethanofruran dehydrogenase subunit C-related protein (NCBI)

Details for MMP0070 - tungsten containing formylmethanofruran dehydrogenase subunit C-related protein (NCBI)

GO Terms: GO:0008152, GO:0018493

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0070

Tuberculist Genomic Region

MMP1605 Pyruvate kinase (NCBI)

Details for MMP1605 - Pyruvate kinase (NCBI)

GO Terms: GO:0006096, GO:0030955, GO:0000287, GO:0004743

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1605

Tuberculist Genomic Region

MMP0215 hypothetical protein (NCBI)

Details for MMP0215 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0215

Tuberculist Genomic Region

MMP1641 soluble P-type ATPase (NCBI)

Details for MMP1641 - soluble P-type ATPase (NCBI)

GO Terms: GO:0008152, GO:0006810, GO:0016020, GO:0005524, GO:0015662

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1641

Tuberculist Genomic Region

MMP0455 Probable amino-acid ABC transporter (NCBI)

Details for MMP0455 - Probable amino-acid ABC transporter (NCBI)

GO Terms: GO:0006810, GO:0030288, GO:0016020, GO:0004970, GO:0005234

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0455

Tuberculist Genomic Region

MMP0672 Binding-protein-dependent transport systems inner membrane component:Ketopantoate reductase ApbA/PanE (NCBI)

Details for MMP0672 - Binding-protein-dependent transport systems inner membrane component:Ketopantoate reductase ApbA/PanE (NCBI)

GO Terms: GO:0006206, GO:0008677, GO:0050661

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0672

Tuberculist Genomic Region

MMP0482 conserved hypothetical protein (NCBI)

Details for MMP0482 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0482

Tuberculist Genomic Region

MMP0693 Aminoacyl-tRNA synthetase, class II (NCBI)

Details for MMP0693 - Aminoacyl-tRNA synthetase, class II (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0693

Tuberculist Genomic Region

MMP0483 conserved hypothetical protein (NCBI)

Details for MMP0483 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0483

Tuberculist Genomic Region

MMP0863 CBS domain (NCBI)

Details for MMP0863 - CBS domain (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0863

Tuberculist Genomic Region

MMP0612 2'-5' RNA ligase (NCBI)

Details for MMP0612 - 2'-5' RNA ligase (NCBI)

GO Terms: GO:0016070, GO:0005622, GO:0008664

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0612

Tuberculist Genomic Region

MMP0903 hypothetical protein (NCBI)

Details for MMP0903 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0903

Tuberculist Genomic Region

MMP0621 conserved hypothetical archaeal protein (NCBI)

Details for MMP0621 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006281, GO:0005622, GO:0003677, GO:0004519

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0621

Tuberculist Genomic Region

MMP1234 conserved hypothetical membrane related protein (NCBI)

Details for MMP1234 - conserved hypothetical membrane related protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1234

Tuberculist Genomic Region

MMP0638 conserved hypothetical protein (NCBI)

Details for MMP0638 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0638

Tuberculist Genomic Region

Displaying 1 - 17 of 17

Motifs

Motif 1: e-value: 9.4 e-value: 580

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0527

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.31

MMP0527

MMP0499

conserved hypothetical protein (NCBI)

MMP1065

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.28

MMP0499

MMP1065

H2

 down-regulates -0.24

H2

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 down-regulates -0.17

MMP0907

MMP1646

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 up-regulates 0.16

MMP1015

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006090 pyruvate metabolic process 3 0.02 1 0.0160
BP GO:0006096 glycolytic process 3 0.02 1 0.0160
BP GO:0016052 carbohydrate catabolic process 3 0.02 1 0.0160
BP GO:0044724 single-organism carbohydrate catabolic p... 3 0.02 1 0.0160
BP GO:0044723 single-organism carbohydrate metabolic p... 7 0.04 1 0.0360
BP GO:0006091 generation of precursor metabolites and ... 8 0.04 1 0.0420
BP GO:0032787 monocarboxylic acid metabolic process 9 0.05 1 0.0470
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016874 ligase activity 11 0.13 2 0.0063
MF GO:0003824 catalytic activity 298 3.47 7 0.0195
MF GO:0005215 transporter activity 32 0.37 2 0.0499

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