Methanococcus maripaludis S2 Module 59 Residual: 0.19 | Syntrophy Portal

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Summary

Residual: 0.19 Score: -28.6019 version: mmp_cmonkey_11_Oct_11

Members

MMP0413 Conserved hypothetical protein (NCBI) Details for MMP0413 - Conserved hypothetical protein (NCBI) GO Terms: GO:0006935, GO:0007165, GO:0016020, GO:0004871 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0413 Tuberculist Genomic Region	MMP1667 flagellin B2 (NCBI) Details for MMP1667 - flagellin B2 (NCBI) GO Terms: GO:0006928, GO:0019861, GO:0005198 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1667 Tuberculist Genomic Region
MMP0927 Chemotaxis protein CheA (NCBI) Details for MMP0927 - Chemotaxis protein CheA (NCBI) GO Terms: GO:0018106, GO:0000160, GO:0006935, GO:0006928, GO:0005737, GO:0000155, GO:0005524 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0927 Tuberculist Genomic Region	MMP1668 flagellin B3 (NCBI) Details for MMP1668 - flagellin B3 (NCBI) GO Terms: GO:0006928, GO:0019861, GO:0005198 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1668 Tuberculist Genomic Region
MMP0928 chemotaxis protein CheD (NCBI) Details for MMP0928 - chemotaxis protein CheD (NCBI) GO Terms: GO:0050568 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0928 Tuberculist Genomic Region	MMP1669 flagella accessory protein C (NCBI) Details for MMP1669 - flagella accessory protein C (NCBI) GO Terms: GO:0006355, GO:0009434, GO:0005634, GO:0003700, GO:0043565, GO:0046983 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1669 Tuberculist Genomic Region
MMP0929 Methyl-accepting chemotaxis protein (MCP) (NCBI) Details for MMP0929 - Methyl-accepting chemotaxis protein (MCP) (NCBI) GO Terms: GO:0016192, GO:0007165, GO:0006935, GO:0016020, GO:0005515, GO:0004871 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0929 Tuberculist Genomic Region	MMP1670 flagella accessory protein D (NCBI) Details for MMP1670 - flagella accessory protein D (NCBI) GO Terms: GO:0001539 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1670 Tuberculist Genomic Region
MMP0931 probable chemotaxis-related protein (NCBI) Details for MMP0931 - probable chemotaxis-related protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0931 Tuberculist Genomic Region	MMP1671 flagella accessory protein E (NCBI) Details for MMP1671 - flagella accessory protein E (NCBI) GO Terms: GO:0001539 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1671 Tuberculist Genomic Region
MMP0932 probable chemotaxis-related protein (NCBI) Details for MMP0932 - probable chemotaxis-related protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0932 Tuberculist Genomic Region	MMP1672 flagella accessory protein F (NCBI) Details for MMP1672 - flagella accessory protein F (NCBI) GO Terms: GO:0019861 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1672 Tuberculist Genomic Region
MMP0933 chemotaxis protein CheY (NCBI) Details for MMP0933 - chemotaxis protein CheY (NCBI) GO Terms: GO:0000160, GO:0006355, GO:0000156 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0933 Tuberculist Genomic Region	MMP1673 flagella accessory protein G (NCBI) Details for MMP1673 - flagella accessory protein G (NCBI) GO Terms: GO:0006928, GO:0016021, GO:0019861, GO:0005198 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1673 Tuberculist Genomic Region
MMP1666 flagellin B1 percursor (NCBI) Details for MMP1666 - flagellin B1 percursor (NCBI) GO Terms: GO:0006928, GO:0019861, GO:0005198 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1666 Tuberculist Genomic Region	MMP1719 conserved hypothetical protein (NCBI) Details for MMP1719 - conserved hypothetical protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1719 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.00055 Motif 2:

e-value: 4800

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
MMP0791 Transcriptional regulator, TetR Family Member (NCBI)	down-regulates	-0.39	MMP0791
MMP0700 transcriptional regulator PadR-like family (NCBI) MMP0791 Transcriptional regulator, TetR Family Member (NCBI)	down-regulates	-0.38	MMP0700 MMP0791
MMP0257 TATA-binding protein (TBP) (NCBI) MMP1210	up-regulates	0.36	MMP0257 MMP1210

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0050896	response to stimulus	13	0.34	3	0.0023
BP	GO:0006935	chemotaxis	4	0.10	2	0.0032
BP	GO:0009605	response to external stimulus	4	0.10	2	0.0032
BP	GO:0042330	taxis	4	0.10	2	0.0032
BP	GO:0042221	response to chemical	8	0.21	2	0.0143
BP	GO:0051179	localization	8	0.21	2	0.0143

Essentiality

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