Methanococcus maripaludis S2 Module 103 Residual: 0.16

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Summary

Residual: 0.16 Score: -30.1981 version: mmp_cmonkey_11_Oct_11

Members

MMP1319 SSU ribosomal protein S13 (NCBI)

Details for MMP1319 - SSU ribosomal protein S13 (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003723, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1319

Tuberculist Genomic Region

MMP1326 DNA-directed RNA polymerase, subunit N (NCBI)

Details for MMP1326 - DNA-directed RNA polymerase, subunit N (NCBI)

GO Terms: GO:0045449, GO:0003902, GO:0003900, GO:0003677, GO:0003899, GO:0003901

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1326

Tuberculist Genomic Region

MMP1320 SSU ribosomal protein S4P (S9E) (NCBI)

Details for MMP1320 - SSU ribosomal protein S4P (S9E) (NCBI)

GO Terms: GO:0006412, GO:0015935, GO:0003735, GO:0019843

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1320

Tuberculist Genomic Region

MMP1327 DNA-directed RNA polymerase, subunit K (NCBI)

Details for MMP1327 - DNA-directed RNA polymerase, subunit K (NCBI)

GO Terms: GO:0006351, GO:0045449, GO:0030880, GO:0003902, GO:0003899, GO:0003901, GO:0003677, GO:0003900

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1327

Tuberculist Genomic Region

MMP1322 DNA-directed RNA polymerase, subunit D (NCBI)

Details for MMP1322 - DNA-directed RNA polymerase, subunit D (NCBI)

GO Terms: GO:0006350, GO:0003902, GO:0003901, GO:0003677, GO:0003900, GO:0046983, GO:0003899

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1322

Tuberculist Genomic Region

MMP1328 Enolase (NCBI)

Details for MMP1328 - Enolase (NCBI)

GO Terms: GO:0006096, GO:0000015, GO:0004634

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1328

Tuberculist Genomic Region

MMP1323 LSU Ribosomal protein L18E (NCBI)

Details for MMP1323 - LSU Ribosomal protein L18E (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0015934, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1323

Tuberculist Genomic Region

MMP1363 RNA polymerase, alpha subunit (NCBI)

Details for MMP1363 - RNA polymerase, alpha subunit (NCBI)

GO Terms: GO:0006350, GO:0005634, GO:0003902, GO:0003901, GO:0003677, GO:0003900, GO:0008270, GO:0003899

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1363

Tuberculist Genomic Region

MMP1324 LSU ribosomal protein L13P (NCBI)

Details for MMP1324 - LSU ribosomal protein L13P (NCBI)

GO Terms: GO:0006412, GO:0015934, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1324

Tuberculist Genomic Region

MMP1364 RNA polymerase, A/beta'/A' subunit (NCBI)

Details for MMP1364 - RNA polymerase, A/beta'/A' subunit (NCBI)

GO Terms: GO:0006350, GO:0003902, GO:0003900, GO:0003677, GO:0003899, GO:0003901

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1364

Tuberculist Genomic Region

MMP1325 SSU ribosomal protein S9P (NCBI)

Details for MMP1325 - SSU ribosomal protein S9P (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1325

Tuberculist Genomic Region

MMP0258 LSU ribosomal protein L12A (NCBI)

Details for MMP0258 - LSU ribosomal protein L12A (NCBI)

GO Terms: GO:0006414, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0258

Tuberculist Genomic Region

Displaying 1 - 12 of 12

Motifs

Motif 1: e-value: 0.61 e-value: 35

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006090 pyruvate metabolic process 3 0.02 1 0.0160
BP GO:0006096 glycolytic process 3 0.02 1 0.0160
BP GO:0016052 carbohydrate catabolic process 3 0.02 1 0.0160
BP GO:0044724 single-organism carbohydrate catabolic p... 3 0.02 1 0.0160
BP GO:0044723 single-organism carbohydrate metabolic p... 7 0.04 1 0.0360
BP GO:0006091 generation of precursor metabolites and ... 8 0.04 1 0.0420
BP GO:0032787 monocarboxylic acid metabolic process 9 0.05 1 0.0470
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0005840 ribosome 32 0.71 4 0.0008
CC GO:0043226 organelle 32 0.71 4 0.0008
CC GO:0043228 non-membrane-bounded organelle 32 0.71 4 0.0008
CC GO:0043229 intracellular organelle 32 0.71 4 0.0008
CC GO:0043232 intracellular non-membrane-bounded organ... 32 0.71 4 0.0008
CC GO:0044444 cytoplasmic part 34 0.75 4 0.0011
CC GO:0030529 ribonucleoprotein complex 36 0.80 4 0.0014
CC GO:0032991 macromolecular complex 41 0.91 4 0.0023
CC GO:0005737 cytoplasm 67 1.48 4 0.0177
CC GO:0044424 intracellular part 71 1.57 4 0.0225
CC GO:0005622 intracellular 76 1.68 4 0.0297
CC GO:0005623 cell 85 1.88 4 0.0468
CC GO:0044464 cell part 85 1.88 4 0.0468
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003677 DNA binding 56 0.51 4 0.0007
MF GO:0019843 rRNA binding 26 0.24 2 0.0206
MF GO:0097159 organic cyclic compound binding 329 2.98 6 0.0259
MF GO:1901363 heterocyclic compound binding 329 2.98 6 0.0259
MF GO:0003899 DNA-directed RNA polymerase activity 5 0.05 1 0.0446
MF GO:0034062 RNA polymerase activity 5 0.05 1 0.0446

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