Methanococcus maripaludis S2 Module 104 Residual: 0.35

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Summary

Residual: 0.35 Score: -13.7768 version: mmp_cmonkey_11_Oct_11

Members

MMP0019 hypothetical protein (NCBI)

Details for MMP0019 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0019

Tuberculist Genomic Region

MMP0126 Biotin synthetase (NCBI)

Details for MMP0126 - Biotin synthetase (NCBI)

GO Terms: GO:0008152, GO:0051536, GO:0004076

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0126

Tuberculist Genomic Region

MMP0170 gamma-F420-2:alpha-L-glutamate ligase (NCBI)

Details for MMP0170 - gamma-F420-2:alpha-L-glutamate ligase (NCBI)

GO Terms: GO:0006464, GO:0005524, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0170

Tuberculist Genomic Region

MMP0161 2-phosphosulfolactate phosphatase (NCBI)

Details for MMP0161 - 2-phosphosulfolactate phosphatase (NCBI)

GO Terms: GO:0019295, GO:0000287, GO:0050532

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0161

Tuberculist Genomic Region

MMP0186 conserved hypothetical protein (NCBI)

Details for MMP0186 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0186

Tuberculist Genomic Region

MMP0214 nucleotide triphosphatase (NCBI)

Details for MMP0214 - nucleotide triphosphatase (NCBI)

GO Terms: GO:0017111

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0214

Tuberculist Genomic Region

MMP0379 conserved hypothetical protein (NCBI)

Details for MMP0379 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0379

Tuberculist Genomic Region

MMP0218 conserved hypothetical protein (NCBI)

Details for MMP0218 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0218

Tuberculist Genomic Region

MMP0986 thymidylate synthase (NCBI)

Details for MMP0986 - thymidylate synthase (NCBI)

GO Terms: GO:0050757, GO:0006118, GO:0051536, GO:0004799, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0986

Tuberculist Genomic Region

MMP0236 conserved hypothetical archaeal protein (NCBI)

Details for MMP0236 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0236

Tuberculist Genomic Region

MMP1027 hypothetical protein (NCBI)

Details for MMP1027 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1027

Tuberculist Genomic Region

MMP0380 DNA polymerase family B (NCBI)

Details for MMP0380 - DNA polymerase family B (NCBI)

GO Terms: GO:0006260, GO:0005634, GO:0003894, GO:0003677, GO:0000166, GO:0016451, GO:0016452, GO:0016000, GO:0016449, GO:0016450, GO:0003893, GO:0015999, GO:0003890, GO:0003891, GO:0003895, GO:0003889, GO:0019984, GO:0016448

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0380

Tuberculist Genomic Region

MMP1202 Protein of unknown function, UPF0066 (NCBI)

Details for MMP1202 - Protein of unknown function, UPF0066 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1202

Tuberculist Genomic Region

MMP0392 Phosphoribosylamine--glycine ligase (NCBI)

Details for MMP0392 - Phosphoribosylamine--glycine ligase (NCBI)

GO Terms: GO:0009113, GO:0005524, GO:0004637

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0392

Tuberculist Genomic Region

MMP1203 Cobalamin (vitamin B12) biosynthesis CbiD protein (NCBI)

Details for MMP1203 - Cobalamin (vitamin B12) biosynthesis CbiD protein (NCBI)

GO Terms: GO:0009236, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1203

Tuberculist Genomic Region

MMP0731 Exonuclease VII, small subunit related protein (NCBI)

Details for MMP0731 - Exonuclease VII, small subunit related protein (NCBI)

GO Terms: GO:0006308, GO:0009318, GO:0008855

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0731

Tuberculist Genomic Region

MMP1485 Molybdenum cofactor biosynthesis protein (NCBI)

Details for MMP1485 - Molybdenum cofactor biosynthesis protein (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1485

Tuberculist Genomic Region

MMP0895 TPR repeat (NCBI)

Details for MMP0895 - TPR repeat (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0895

Tuberculist Genomic Region

MMP1494

Details for MMP1494 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1494

Tuberculist Genomic Region

MMP0909 conserved hypothetical protein (NCBI)

Details for MMP0909 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0909

Tuberculist Genomic Region

MMP1600 Ribosomal protein S6 modification enzyme (glutaminyl transferase) related (NCBI)

Details for MMP1600 - Ribosomal protein S6 modification enzyme (glutaminyl transferase) related (NCBI)

GO Terms: GO:0006464, GO:0005524, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1600

Tuberculist Genomic Region

MMP1232 conserved hypothetical protein (NCBI)

Details for MMP1232 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0009435, GO:0005524, GO:0016740, GO:0003952

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1232

Tuberculist Genomic Region

MMP0011 C-5 cytosine-specific DNA methylase (NCBI)

Details for MMP0011 - C-5 cytosine-specific DNA methylase (NCBI)

GO Terms: GO:0006306, GO:0003677, GO:0051720, GO:0051718, GO:0051719

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0011

Tuberculist Genomic Region

MMP1350 conserved hypothetical protein (NCBI)

Details for MMP1350 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0046872, GO:0051536, GO:0003824, GO:0031419

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1350

Tuberculist Genomic Region

MMP0077 conserved hypothetical protein (NCBI)

Details for MMP0077 - conserved hypothetical protein (NCBI)

GO Terms: GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0077

Tuberculist Genomic Region

MMP1377 conserved hypothetical protein (NCBI)

Details for MMP1377 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1377

Tuberculist Genomic Region

MMP0125 conserved archaeal fibrillarin homolog (NCBI)

Details for MMP0125 - conserved archaeal fibrillarin homolog (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0125

Tuberculist Genomic Region

MMP1264 conserved hypothetical protein (NCBI)

Details for MMP1264 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1264

Tuberculist Genomic Region

Displaying 1 - 28 of 28

Motifs

Motif 1: e-value: 300 e-value: 3100

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0097

Transcriptional regulator protein, Helix-turn-helix motif (NCBI)

MMP1467

conserved hypothetical protein (NCBI)
 up-regulates 0.49

MMP0097

MMP1467

MMP0032

ArsR family member (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.44

MMP0032

MMP0907

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0046483 heterocycle metabolic process 90 1.88 4 0.0470
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0051536 iron-sulfur cluster binding 67 1.04 4 0.0150
MF GO:0051540 metal cluster binding 67 1.04 4 0.0150
MF GO:0051539 4 iron, 4 sulfur cluster binding 37 0.57 3 0.0160
MF GO:0016791 phosphatase activity 3 0.05 1 0.0460
MF GO:0042578 phosphoric ester hydrolase activity 3 0.05 1 0.0460

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