Methanococcus maripaludis S2 Module 158 Residual: 0.08

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Summary

Residual: 0.08 Score: -26.9391 version: mmp_cmonkey_11_Oct_11

Members

MMP1406 Protein translation factor SUI1 homolog (NCBI)

Details for MMP1406 - Protein translation factor SUI1 homolog (NCBI)

GO Terms: GO:0006413, GO:0003743

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1406

Tuberculist Genomic Region

MMP1410 LSU ribosomal protein L24P (NCBI)

Details for MMP1410 - LSU ribosomal protein L24P (NCBI)

GO Terms: GO:0006412, GO:0015934, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1410

Tuberculist Genomic Region

MMP1407 Protein of unknown function UPF0086 (NCBI)

Details for MMP1407 - Protein of unknown function UPF0086 (NCBI)

GO Terms: GO:0008033, GO:0030677, GO:0004526

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1407

Tuberculist Genomic Region

MMP1411 SSU ribosomal protein S4E (NCBI)

Details for MMP1411 - SSU ribosomal protein S4E (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003723, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1411

Tuberculist Genomic Region

MMP1408 SSU ribosomal protein S17P (NCBI)

Details for MMP1408 - SSU ribosomal protein S17P (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1408

Tuberculist Genomic Region

MMP1412 LSU ribosomal protein L5P (NCBI)

Details for MMP1412 - LSU ribosomal protein L5P (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1412

Tuberculist Genomic Region

MMP1409 LSU ribosomal protein L14P (NCBI)

Details for MMP1409 - LSU ribosomal protein L14P (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1409

Tuberculist Genomic Region

MMP1413 SSU ribosomal protein S14P (NCBI)

Details for MMP1413 - SSU ribosomal protein S14P (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1413

Tuberculist Genomic Region

Displaying 1 - 8 of 8

Motifs

Motif 1:

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0460

Conserved Hypothetical Protein (NCBI)
 down-regulates -0.48

MMP0460

MMP0568

transcriptional regulator related protein (NCBI)
 up-regulates 0.38

MMP0568

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)

MMP0257

TATA-binding protein (TBP) (NCBI)
 down-regulates -0.32

MMP0052

MMP0257

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.29

MMP0907

MMP1646

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009889 regulation of biosynthetic process 5 0.03 1 0.0260
BP GO:0010468 regulation of gene expression 5 0.03 1 0.0260
BP GO:0010556 regulation of macromolecule biosynthetic... 5 0.03 1 0.0260
BP GO:0019222 regulation of metabolic process 5 0.03 1 0.0260
BP GO:0031323 regulation of cellular metabolic process 5 0.03 1 0.0260
BP GO:0031326 regulation of cellular biosynthetic proc... 5 0.03 1 0.0260
BP GO:0060255 regulation of macromolecule metabolic pr... 5 0.03 1 0.0260
BP GO:0080090 regulation of primary metabolic process 5 0.03 1 0.0260
BP GO:2000112 regulation of cellular macromolecule bio... 5 0.03 1 0.0260
BP GO:0010467 gene expression 7 0.04 1 0.0365
BP GO:0009059 macromolecule biosynthetic process 8 0.04 1 0.0417
BP GO:0034645 cellular macromolecule biosynthetic proc... 8 0.04 1 0.0417
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0015934 large ribosomal subunit 7 0.04 1 0.0390
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0097159 organic cyclic compound binding 329 2.55 6 0.0058
MF GO:1901363 heterocyclic compound binding 329 2.55 6 0.0058
MF GO:0005488 binding 431 3.35 6 0.0296

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