Desulfovibrio vulgaris Hildenborough Module 11 Residual: 0.49

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Summary

Residual: 0.49 Score: -37.3768 version: dvh_cmonkey_11_Mar_02

Members

DVU0170 Methyl-accepting chemotaxis protein

Details for DVU0170 - Methyl-accepting chemotaxis protein

GO Terms: GO:0006935, GO:0016020, GO:0046872, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0170

Tuberculist Genomic Region

DVU2117 Membrane protein, putative

Details for DVU2117 - Membrane protein, putative

GO Terms: GO:0004190, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2117

Tuberculist Genomic Region

DVU0729 Uncharacterized protein

Details for DVU0729 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0729

Tuberculist Genomic Region

DVU2264 Uncharacterized protein

Details for DVU2264 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2264

Tuberculist Genomic Region

DVU0820 Uncharacterized protein

Details for DVU0820 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0820

Tuberculist Genomic Region

DVU2304 Uncharacterized protein

Details for DVU2304 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2304

Tuberculist Genomic Region

DVU0821 Uncharacterized protein

Details for DVU0821 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0821

Tuberculist Genomic Region

DVU2345 Uncharacterized protein

Details for DVU2345 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2345

Tuberculist Genomic Region

DVU0822 Uncharacterized protein

Details for DVU0822 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0822

Tuberculist Genomic Region

DVU2585 Methyl-accepting chemotaxis protein

Details for DVU2585 - Methyl-accepting chemotaxis protein

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2585

Tuberculist Genomic Region

DVU0912 Conserved domain protein

Details for DVU0912 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0912

Tuberculist Genomic Region

DVU2615 Bacterial extracellular solute-binding protein, family 3

Details for DVU2615 - Bacterial extracellular solute-binding protein, family 3

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2615

Tuberculist Genomic Region

DVU0937 Uncharacterized protein

Details for DVU0937 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0937

Tuberculist Genomic Region

DVU2616 Sensory box histidine kinase/response regulator

Details for DVU2616 - Sensory box histidine kinase/response regulator

GO Terms: GO:0016020, GO:0000155, GO:0042558, GO:0006355

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2616

Tuberculist Genomic Region

DVU1121 Uncharacterized protein

Details for DVU1121 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1121

Tuberculist Genomic Region

DVU2676 Uncharacterized protein

Details for DVU2676 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2676

Tuberculist Genomic Region

DVU1263 Type 4 prepilin-like proteins leader peptide-processing enzyme

Details for DVU1263 - Type 4 prepilin-like proteins leader peptide-processing enzyme

GO Terms: GO:0004190, GO:0016021, GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1263

Tuberculist Genomic Region

DVU2833 Uncharacterized protein

Details for DVU2833 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2833

Tuberculist Genomic Region

DVU1773 Uncharacterized protein

Details for DVU1773 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1773

Tuberculist Genomic Region

DVU3045 Sensory box histidine kinase/response regulator

Details for DVU3045 - Sensory box histidine kinase/response regulator

GO Terms: GO:0016020, GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3045

Tuberculist Genomic Region

DVU1774 Uncharacterized protein

Details for DVU1774 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1774

Tuberculist Genomic Region

DVU3107 Cytochrome c family protein

Details for DVU3107 - Cytochrome c family protein

GO Terms: GO:0009055, GO:0020037

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3107

Tuberculist Genomic Region

DVU1811 Protoheme IX farnesyltransferase

Details for DVU1811 - Protoheme IX farnesyltransferase

GO Terms: GO:0048034, GO:0016021, GO:0005886, GO:0008495

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1811

Tuberculist Genomic Region

DVU3155 Methyl-accepting chemotaxis protein DcrH

Details for DVU3155 - Methyl-accepting chemotaxis protein DcrH

GO Terms: GO:0016021, GO:0046872, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3155

Tuberculist Genomic Region

DVU1812 Cytochrome c oxidase, subunit II, putative

Details for DVU1812 - Cytochrome c oxidase, subunit II, putative

GO Terms: GO:0005507, GO:0004129, GO:0022900, GO:0020037, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1812

Tuberculist Genomic Region

DVUA0025 Response regulator receiver domain protein

Details for DVUA0025 - Response regulator receiver domain protein

GO Terms: GO:0000160, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0025

Tuberculist Genomic Region

DVU2107 Uncharacterized protein

Details for DVU2107 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2107

Tuberculist Genomic Region

Displaying 1 - 27 of 27

Motifs

Motif 1: e-value: 0.1 e-value: 3700

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0309

Transcriptional regulator, LysR family
 down-regulates -0.12

DVU0309

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0004175 endopeptidase activity 7 0.02 2 0.0002
MF GO:0070011 peptidase activity, acting on L-amino ac... 12 0.04 2 0.0005
MF GO:0008233 peptidase activity 20 0.06 2 0.0014
MF GO:0005507 copper ion binding 3 0.01 1 0.0094
MF GO:0016787 hydrolase activity 100 0.31 2 0.0326
MF GO:0009055 electron carrier activity 16 0.05 1 0.0491

Comments

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