Desulfovibrio vulgaris Hildenborough Module 42 Residual: 0.35 | Syntrophy Portal

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Summary

Residual: 0.35 Score: -75.2051 version: dvh_cmonkey_11_Mar_02

Members

DVU1716 Uncharacterized protein Details for DVU1716 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1716 Tuberculist Genomic Region	DVU2163 Uncharacterized protein Details for DVU2163 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2163 Tuberculist Genomic Region
DVU1718 Uncharacterized protein Details for DVU1718 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1718 Tuberculist Genomic Region	DVU2164 Lipoprotein, putative Details for DVU2164 - Lipoprotein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2164 Tuberculist Genomic Region
DVU1741 Uncharacterized protein Details for DVU1741 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1741 Tuberculist Genomic Region	DVU2170 Minor capsid protein C Details for DVU2170 - Minor capsid protein C GO Terms: GO:0008233 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2170 Tuberculist Genomic Region
DVU2003 Transposase, IS5 family, truncation Details for DVU2003 - Transposase, IS5 family, truncation GO Terms: GO:0003677, GO:0004803, GO:0006313 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2003 Tuberculist Genomic Region	DVU2542 Uncharacterized protein Details for DVU2542 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2542 Tuberculist Genomic Region
DVU2160 Uncharacterized protein Details for DVU2160 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2160 Tuberculist Genomic Region	DVU2832 Transcriptional regulator cII, putative Details for DVU2832 - Transcriptional regulator cII, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2832 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 6700 Motif 2:

e-value: 17000

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0525 Transcriptional regulator, MarR family	up-regulates	0.11	DVU0525
[field_regulator_taxonomy_regulat_1]	up-regulates	0.71	DVU0597 knockout
DVU0804 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.26	DVU0804
DVU1083 Phosphate regulon transcriptional regulator PhoB	up-regulates	0.15	DVU1083
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.12	DVU1156
DVU1561 Molybdenum-binding protein, HTH domain	up-regulates	0.10	DVU1561
DVU2106 Sigma-54 dependent transcriptional regulator	down-regulates	-0.21	DVU2106
DVU2567 Uncharacterized protein	up-regulates	0.23	DVU2567
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.10	DVU3142
[field_regulator_taxonomy_regulat_1]	up-regulates	17.66	Oxygen

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0008233	peptidase activity	20	0.03	1	0.0310

Essentiality

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