Desulfovibrio vulgaris Hildenborough Module 98 Residual: 0.39

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Summary

Residual: 0.39 Score: -58.914 version: dvh_cmonkey_11_Mar_02

Members

DVU0280 Glycosyl transferase, group 1 family protein

Details for DVU0280 - Glycosyl transferase, group 1 family protein

GO Terms: GO:0009058, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0280

Tuberculist Genomic Region

DVU1796 Uncharacterized protein

Details for DVU1796 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1796

Tuberculist Genomic Region

DVU0281 Exopolysaccharide biosynthesis protein, putative

Details for DVU0281 - Exopolysaccharide biosynthesis protein, putative

GO Terms: GO:0016021, GO:0005886, GO:0000271, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0281

Tuberculist Genomic Region

DVU2373 Outer membrane protein assembly factor BamA

Details for DVU2373 - Outer membrane protein assembly factor BamA

GO Terms: GO:0043165, GO:0009279, GO:0016021, GO:0051205

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2373

Tuberculist Genomic Region

DVU0669 Uncharacterized protein

Details for DVU0669 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0669

Tuberculist Genomic Region

DVU2569 Peptidyl-prolyl cis-trans isomerase

Details for DVU2569 - Peptidyl-prolyl cis-trans isomerase

GO Terms: GO:0003755, GO:0006457

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2569

Tuberculist Genomic Region

DVU0817 Uncharacterized protein

Details for DVU0817 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0817

Tuberculist Genomic Region

DVUA0074 Sulfotransferase family protein

Details for DVUA0074 - Sulfotransferase family protein

GO Terms: GO:0008146

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0074

Tuberculist Genomic Region

DVU0954 LPS-assembly protein LptD

Details for DVU0954 - LPS-assembly protein LptD

GO Terms: GO:0043165, GO:0009279, GO:0010033

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0954

Tuberculist Genomic Region

DVU1798 Uncharacterized protein

Details for DVU1798 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1798

Tuberculist Genomic Region

DVU1688 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative

Details for DVU1688 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative

GO Terms: GO:0016746

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1688

Tuberculist Genomic Region

DVU1809 L-aspartate oxidase

Details for DVU1809 - L-aspartate oxidase

GO Terms: GO:0008734, GO:0044318, GO:0009435, GO:0005737

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1809

Tuberculist Genomic Region

DVU1690 Transcriptional regulator, TetR family

Details for DVU1690 - Transcriptional regulator, TetR family

GO Terms: GO:0003677, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1690

Tuberculist Genomic Region

DVU1931 Iron-sulfur cluster-binding protein

Details for DVU1931 - Iron-sulfur cluster-binding protein

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1931

Tuberculist Genomic Region

DVU1793 Uncharacterized protein

Details for DVU1793 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1793

Tuberculist Genomic Region

Displaying 1 - 15 of 15

Motifs

Motif 1: e-value: 210 e-value: 19000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0277

Transcriptional regulator, AraC family
 up-regulates 0.13

DVU0277

DVU0916

Redox-sensing transcriptional repressor Rex
 up-regulates 0.11

DVU0916

DVU2036

Helix-turn-helix protein, CopG family
 up-regulates 0.23

DVU2036

DVU2114

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.21

DVU2114

DVU2423

Transcriptional regulator, putative
 down-regulates -0.17

DVU2423

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0043163 cell envelope organization 4 0.03 2 0.0003
BP GO:0043165 Gram-negative-bacterium-type cell outer ... 4 0.03 2 0.0003
BP GO:0044091 membrane biogenesis 4 0.03 2 0.0003
BP GO:0044802 single-organism membrane organization 4 0.03 2 0.0003
BP GO:0061024 membrane organization 4 0.03 2 0.0003
BP GO:0071709 membrane assembly 4 0.03 2 0.0003
BP GO:0045229 external encapsulating structure organiz... 9 0.07 2 0.0016
BP GO:0022607 cellular component assembly 18 0.15 2 0.0066
BP GO:0044085 cellular component biogenesis 21 0.17 2 0.0090
BP GO:0016043 cellular component organization 28 0.23 2 0.0159
BP GO:0071840 cellular component organization or bioge... 31 0.25 2 0.0195
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003755 peptidyl-prolyl cis-trans isomerase acti... 6 0.03 1 0.0278
MF GO:0016859 cis-trans isomerase activity 6 0.03 1 0.0278

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