Desulfovibrio vulgaris Hildenborough Module 111 Residual: 0.39 | Syntrophy Portal

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Summary

Residual: 0.39 Score: -62.5753 version: dvh_cmonkey_11_Mar_02

Members

DVU1519 Transcriptional regulator, putative Details for DVU1519 - Transcriptional regulator, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1519 Tuberculist Genomic Region	DVU2174 Uncharacterized protein Details for DVU2174 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2174 Tuberculist Genomic Region
DVU1520 Uncharacterized protein Details for DVU1520 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1520 Tuberculist Genomic Region	DVU2177 Uncharacterized protein Details for DVU2177 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2177 Tuberculist Genomic Region
DVU1521 Uncharacterized protein Details for DVU1521 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1521 Tuberculist Genomic Region	DVU2709 Uncharacterized protein Details for DVU2709 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2709 Tuberculist Genomic Region
DVU2000 Uncharacterized protein Details for DVU2000 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2000 Tuberculist Genomic Region	DVU2837 Uncharacterized protein Details for DVU2837 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2837 Tuberculist Genomic Region
DVU2006 Uncharacterized protein Details for DVU2006 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2006 Tuberculist Genomic Region	DVU2838 Uncharacterized protein Details for DVU2838 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2838 Tuberculist Genomic Region
DVU2007 Nuclease, putative Details for DVU2007 - Nuclease, putative GO Terms: GO:0004518, GO:0003676 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2007 Tuberculist Genomic Region	DVUA0019 Type II DNA modification methyltransferase, putative Details for DVUA0019 - Type II DNA modification methyltransferase, putative GO Terms: GO:0003677, GO:0006304, GO:0008168 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0019 Tuberculist Genomic Region
DVU2105 Uncharacterized protein Details for DVU2105 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2105 Tuberculist Genomic Region	DVUA0020 Type II restriction endonuclease, putative Details for DVUA0020 - Type II restriction endonuclease, putative GO Terms: GO:0003677, GO:0009307, GO:0009036 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0020 Tuberculist Genomic Region
DVU2106 Sigma-54 dependent transcriptional regulator Details for DVU2106 - Sigma-54 dependent transcriptional regulator GO Terms: GO:0005524, GO:0003677, GO:0000155, GO:0006355, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2106 Tuberculist Genomic Region	DVU2840 Uncharacterized protein Details for DVU2840 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2840 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.00074 Motif 2:

e-value: 17

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1144 Transcriptional regulator, Cro/CI family	up-regulates	0.10	DVU1144
DVU1690 Transcriptional regulator, TetR family	up-regulates	0.10	DVU1690
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.21	DVU2114
DVU2527 Transcriptional regulator, putative	up-regulates	0.19	DVU2527
DVU2989 Psp operon transcriptional activator	down-regulates	-0.10	DVU2989
DVU3186 Uncharacterized protein	up-regulates	0.12	DVU3186

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0004518	nuclease activity	15	0.05	1	0.0460

Essentiality

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