Desulfovibrio vulgaris Hildenborough Module 130 Residual: 0.38 | Syntrophy Portal

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Summary

Residual: 0.38 Score: -68.3163 version: dvh_cmonkey_11_Mar_02

Members

DVU0365 Uncharacterized protein Details for DVU0365 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0365 Tuberculist Genomic Region	DVUA0009 Nitrogenase MoFe cofactor biosynthesis protein NifE domain protein Details for DVUA0009 - Nitrogenase MoFe cofactor biosynthesis protein NifE domain protein GO Terms: GO:0009399, GO:0016163, GO:0006461 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0009 Tuberculist Genomic Region
DVU1068 Branched-chain amino acid ABC transporter, permease protein Details for DVU1068 - Branched-chain amino acid ABC transporter, permease protein GO Terms: GO:0016021, GO:0005886, GO:0005215 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1068 Tuberculist Genomic Region	DVU0375 Glu/Leu/Phe/Val dehydrogenase family protein Details for DVU0375 - Glu/Leu/Phe/Val dehydrogenase family protein GO Terms: GO:0006520, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0375 Tuberculist Genomic Region
DVU1829 Uncharacterized protein Details for DVU1829 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1829 Tuberculist Genomic Region	DVU0497 Uncharacterized protein Details for DVU0497 - Uncharacterized protein GO Terms: GO:0051536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0497 Tuberculist Genomic Region
DVU2159 Uncharacterized protein Details for DVU2159 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2159 Tuberculist Genomic Region	DVU0887 Transglycosylase, putative Details for DVU0887 - Transglycosylase, putative GO Terms: GO:0004553, GO:0019867, GO:0009254 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0887 Tuberculist Genomic Region
DVU2161 Uncharacterized protein Details for DVU2161 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2161 Tuberculist Genomic Region	DVU1490 Tail tape measure protein, putative Details for DVU1490 - Tail tape measure protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1490 Tuberculist Genomic Region
DVU2266 Uncharacterized protein Details for DVU2266 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2266 Tuberculist Genomic Region	DVU3129 Uncharacterized protein Details for DVU3129 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3129 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 1900 Motif 2:

e-value: 2500

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.27	DVU1517
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.46	DVU2832
DVU3255 Transcriptional regulator, CopG family	down-regulates	-0.15	DVU3255

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0071941	nitrogen cycle metabolic process	3	0.02	1	0.0160

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016798	hydrolase activity, acting on glycosyl b...	6	0.01	1	0.0093

Essentiality

Comments

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