Desulfovibrio vulgaris Hildenborough Module 173 Residual: 0.29 | Syntrophy Portal

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Summary

Residual: 0.29 Score: -102.207 version: dvh_cmonkey_11_Mar_02

Members

DVU0419 Carboxynorspermidine/carboxyspermidine decarboxylase Details for DVU0419 - Carboxynorspermidine/carboxyspermidine decarboxylase GO Terms: GO:0016831, GO:0005737, GO:0008295 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0419 Tuberculist Genomic Region	DVU2494 Protease HtpX homolog Details for DVU2494 - Protease HtpX homolog GO Terms: GO:0016021, GO:0004222, GO:0005886, GO:0008270 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2494 Tuberculist Genomic Region
DVU0576 Peptide methionine sulfoxide reductase MsrB Details for DVU0576 - Peptide methionine sulfoxide reductase MsrB GO Terms: GO:0033743, GO:0030091, GO:0006979 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0576 Tuberculist Genomic Region	DVU2495 Thioesterase family protein Details for DVU2495 - Thioesterase family protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2495 Tuberculist Genomic Region
DVU2975 Hydrolase, putative Details for DVU2975 - Hydrolase, putative GO Terms: GO:0016787 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2975 Tuberculist Genomic Region	DVU2977 Uncharacterized protein Details for DVU2977 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2977 Tuberculist Genomic Region
DVU0420 Uncharacterized protein Details for DVU0420 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0420 Tuberculist Genomic Region	DVU2978 Hydrolase, haloacid dehalogenase-like family Details for DVU2978 - Hydrolase, haloacid dehalogenase-like family GO Terms: GO:0016787 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2978 Tuberculist Genomic Region
DVU2282 Uncharacterized protein Details for DVU2282 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2282 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 38 Motif 2:

e-value: 13000

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0277 Transcriptional regulator, AraC family	down-regulates	-0.16	DVU0277
DVU0813 Heat-inducible transcription repressor HrcA	up-regulates	0.68	DVU0813
DVU2909 Transcriptional regulator, MarR family	up-regulates	0.21	DVU2909

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0003824	catalytic activity	427	1.33	4	0.0122
MF	GO:0016831	carboxy-lyase activity	6	0.02	1	0.0186
MF	GO:0016830	carbon-carbon lyase activity	10	0.03	1	0.0309
MF	GO:0016787	hydrolase activity	100	0.31	2	0.0326

Essentiality

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