Desulfovibrio vulgaris Hildenborough Module 264 Residual: 0.40 | Syntrophy Portal

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Summary

Residual: 0.40 Score: -57.1883 version: dvh_cmonkey_11_Mar_02

Members

DVU1265 Uncharacterized protein Details for DVU1265 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1265 Tuberculist Genomic Region	DVU2218 Putative ribosome biogenesis GTPase RsgA Details for DVU2218 - Putative ribosome biogenesis GTPase RsgA GO Terms: GO:0005525, GO:0003924, GO:0046872 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2218 Tuberculist Genomic Region
DVU2631 Uncharacterized protein Details for DVU2631 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2631 Tuberculist Genomic Region	DVU2595 Uncharacterized protein Details for DVU2595 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2595 Tuberculist Genomic Region
DVU2754 Quinone oxidoreductase Details for DVU2754 - Quinone oxidoreductase GO Terms: GO:0003960, GO:0008270 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2754 Tuberculist Genomic Region	DVU2740 High-affinity branched-chain amino acid ABC transporter, ATP-binding protein Details for DVU2740 - High-affinity branched-chain amino acid ABC transporter, ATP-binding protein GO Terms: GO:0005524, GO:0016887 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2740 Tuberculist Genomic Region
DVU0016 Uncharacterized protein Details for DVU0016 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0016 Tuberculist Genomic Region	DVU2828 Site-specific recombinase, phage integrase family Details for DVU2828 - Site-specific recombinase, phage integrase family GO Terms: GO:0003677, GO:0015074, GO:0006310 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2828 Tuberculist Genomic Region
DVU0444 CBS domain protein Details for DVU0444 - CBS domain protein GO Terms: GO:0008773 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0444 Tuberculist Genomic Region	DVU3251 Membrane protein, HPP family Details for DVU3251 - Membrane protein, HPP family GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3251 Tuberculist Genomic Region
DVU1695 Tail fiber assembly protein, putative Details for DVU1695 - Tail fiber assembly protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1695 Tuberculist Genomic Region	DVU3370 Conserved domain protein Details for DVU3370 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3370 Tuberculist Genomic Region
DVU2192 Uncharacterized protein Details for DVU2192 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2192 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 500 Motif 2:

e-value: 1300

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0596 DNA-binding response regulator LytR	up-regulates	0.20	DVU0596
DVU0653 Sigma-54 dependent transcriptional regulator, putative/response regulator	down-regulates	-0.13	DVU0653
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.12	DVU1156
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.16	DVU1517
DVU1561 Molybdenum-binding protein, HTH domain	up-regulates	0.12	DVU1561

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0008773	[protein-PII] uridylyltransferase activi...	3	0.01	1	0.0117
MF	GO:0016651	oxidoreductase activity, acting on NAD(P...	3	0.01	1	0.0117
MF	GO:0016655	oxidoreductase activity, acting on NAD(P...	3	0.01	1	0.0117
MF	GO:0070569	uridylyltransferase activity	3	0.01	1	0.0117
MF	GO:0016779	nucleotidyltransferase activity	6	0.02	1	0.0232

Essentiality

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