Desulfovibrio vulgaris Hildenborough Module 290 Residual: 0.33 | Syntrophy Portal

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Summary

Residual: 0.33 Score: -89.3264 version: dvh_cmonkey_11_Mar_02

Members

DVU0475 Membrane protein, putative, truncation Details for DVU0475 - Membrane protein, putative, truncation GO Terms: GO:0016020, GO:0016747 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0475 Tuberculist Genomic Region	DVU2836 Uncharacterized protein Details for DVU2836 - Uncharacterized protein GO Terms: GO:0043565 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2836 Tuberculist Genomic Region
DVU1510 Uncharacterized protein Details for DVU1510 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1510 Tuberculist Genomic Region	DVU2837 Uncharacterized protein Details for DVU2837 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2837 Tuberculist Genomic Region
DVU2006 Uncharacterized protein Details for DVU2006 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2006 Tuberculist Genomic Region	DVU2838 Uncharacterized protein Details for DVU2838 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2838 Tuberculist Genomic Region
DVU2105 Uncharacterized protein Details for DVU2105 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2105 Tuberculist Genomic Region	DVU2839 Uncharacterized protein Details for DVU2839 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2839 Tuberculist Genomic Region
DVU2686 Peptidase, S24 family Details for DVU2686 - Peptidase, S24 family GO Terms: GO:0003677, GO:0045892 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2686 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 2.7 Motif 2:

e-value: 40

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0916 Redox-sensing transcriptional repressor Rex	up-regulates	0.23	DVU0916
DVU0942 Transcriptional regulator, Fur family	up-regulates	0.18	DVU0942
DVU2106 Sigma-54 dependent transcriptional regulator	up-regulates	0.11	DVU2106
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	up-regulates	0.19	DVU2114
DVU2527 Transcriptional regulator, putative	up-regulates	0.11	DVU2527
DVU2633 Transcriptional regulator, putative	up-regulates	0.12	DVU2633
DVU2835 Transcriptional regulator, putative	up-regulates	0.12	DVU2835

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0003677	DNA binding	159	0.25	2	0.0150
MF	GO:0043565	sequence-specific DNA binding	15	0.02	1	0.0230
MF	GO:0003676	nucleic acid binding	222	0.35	2	0.0300

Essentiality

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