Desulfovibrio vulgaris Hildenborough Module 327 Residual: 0.42

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Summary

Residual: 0.42 Score: -45.1728 version: dvh_cmonkey_11_Mar_02

Members

DVU0021 Conserved domain protein

Details for DVU0021 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0021

Tuberculist Genomic Region

DVU1772 Pyridine nucleotide-disulfide oxidoreductase

Details for DVU1772 - Pyridine nucleotide-disulfide oxidoreductase

GO Terms: GO:0051539, GO:0010181, GO:0008137, GO:0050660

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1772

Tuberculist Genomic Region

DVU0091 Uncharacterized protein

Details for DVU0091 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0091

Tuberculist Genomic Region

DVU2367 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

Details for DVU2367 - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

GO Terms: GO:0008780, GO:0005737, GO:0009245

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2367

Tuberculist Genomic Region

DVU0327 Exopolysaccharide biosynthesis protein, putative

Details for DVU0327 - Exopolysaccharide biosynthesis protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0327

Tuberculist Genomic Region

DVU2558 Biotin synthase

Details for DVU2558 - Biotin synthase

GO Terms: GO:0051537, GO:0051539, GO:0009102, GO:0004076, GO:0005506

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2558

Tuberculist Genomic Region

DVU0336 Aminotransferase, DegT/DnrJ/EryC1/StrS family

Details for DVU0336 - Aminotransferase, DegT/DnrJ/EryC1/StrS family

GO Terms: GO:0030170, GO:0008483

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0336

Tuberculist Genomic Region

DVU2757 Cyclic dehypoxanthine futalosine synthase

Details for DVU2757 - Cyclic dehypoxanthine futalosine synthase

GO Terms: GO:0051539, GO:0009234, GO:0016765

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2757

Tuberculist Genomic Region

DVU0340 Acetyltransferase, CysE/LacA/LpxA/NodL family

Details for DVU0340 - Acetyltransferase, CysE/LacA/LpxA/NodL family

GO Terms: GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0340

Tuberculist Genomic Region

DVU2942 Adenylosuccinate lyase

Details for DVU2942 - Adenylosuccinate lyase

GO Terms: GO:0044208, GO:0006189, GO:0070626, GO:0004018

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2942

Tuberculist Genomic Region

DVU0451 Chloride channel family protein

Details for DVU0451 - Chloride channel family protein

GO Terms: GO:0016020, GO:0005247

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0451

Tuberculist Genomic Region

DVU3167 Heme biosynthesis protein, putative

Details for DVU3167 - Heme biosynthesis protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3167

Tuberculist Genomic Region

DVU1056 Putative ABC transporter ATP-binding protein DVU_1056

Details for DVU1056 - Putative ABC transporter ATP-binding protein DVU_1056

GO Terms: GO:0005524, GO:0016887, GO:0005886, GO:0006810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1056

Tuberculist Genomic Region

DVU3168 Glutamate-1-semialdehyde 2,1-aminomutase

Details for DVU3168 - Glutamate-1-semialdehyde 2,1-aminomutase

GO Terms: GO:0005737, GO:0042286, GO:0006782, GO:0030170, GO:0008483

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3168

Tuberculist Genomic Region

DVU1276 Uncharacterized protein

Details for DVU1276 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1276

Tuberculist Genomic Region

DVU3174 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE

Details for DVU3174 - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE

GO Terms: GO:0008425, GO:0009060, GO:0009234, GO:0006744

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3174

Tuberculist Genomic Region

DVU1347 Peptidase, M23/M37 family

Details for DVU1347 - Peptidase, M23/M37 family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1347

Tuberculist Genomic Region

DVU3175 Membrane protein, putative

Details for DVU3175 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3175

Tuberculist Genomic Region

DVU1611 Molybdopterin oxidoreductase domain protein

Details for DVU1611 - Molybdopterin oxidoreductase domain protein

GO Terms: GO:0051536, GO:0046872, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1611

Tuberculist Genomic Region

DVU3239 PAP2 family protein

Details for DVU3239 - PAP2 family protein

GO Terms: GO:0003824, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3239

Tuberculist Genomic Region

Displaying 1 - 20 of 20

Motifs

Motif 1: e-value: 920 e-value: 6.6

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0653

Sigma-54 dependent transcriptional regulator, putative/response regulator
 up-regulates 0.12

DVU0653

DVU1063

Transcriptional regulatory protein
 down-regulates -0.13

DVU1063

DVU3142

Sigma-54 dependent transcriptional regulator
 down-regulates -0.13

DVU3142

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006167 AMP biosynthetic process 3 0.01 1 0.0081
BP GO:0046033 AMP metabolic process 3 0.01 1 0.0081
BP GO:0042451 purine nucleoside biosynthetic process 5 0.01 1 0.0136
BP GO:0046129 purine ribonucleoside biosynthetic proce... 5 0.01 1 0.0136
BP GO:0042278 purine nucleoside metabolic process 8 0.02 1 0.0217
BP GO:0046128 purine ribonucleoside metabolic process 8 0.02 1 0.0217
BP GO:0009163 nucleoside biosynthetic process 13 0.04 1 0.0352
BP GO:0042455 ribonucleoside biosynthetic process 13 0.04 1 0.0352
BP GO:1901659 glycosyl compound biosynthetic process 13 0.04 1 0.0352
BP GO:0009119 ribonucleoside metabolic process 16 0.04 1 0.0434
BP GO:0006164 purine nucleotide biosynthetic process 17 0.05 1 0.0461
BP GO:0009127 purine nucleoside monophosphate biosynth... 17 0.05 1 0.0461
BP GO:0009152 purine ribonucleotide biosynthetic proce... 17 0.05 1 0.0461
BP GO:0009168 purine ribonucleoside monophosphate bios... 17 0.05 1 0.0461
BP GO:0072522 purine-containing compound biosynthetic ... 17 0.05 1 0.0461
BP GO:0006163 purine nucleotide metabolic process 18 0.05 1 0.0488
BP GO:0009126 purine nucleoside monophosphate metaboli... 18 0.05 1 0.0488
BP GO:0009150 purine ribonucleotide metabolic process 18 0.05 1 0.0488
BP GO:0009167 purine ribonucleoside monophosphate meta... 18 0.05 1 0.0488
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0051536 iron-sulfur cluster binding 110 0.86 4 0.0072
MF GO:0051540 metal cluster binding 110 0.86 4 0.0072
MF GO:0008374 O-acyltransferase activity 3 0.02 1 0.0233

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