Methanococcus maripaludis S2 Module 2 Residual: 0.20 | Syntrophy Portal

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Summary

Residual: 0.20 Score: -23.1336 version: mmp_cmonkey_11_Oct_11

Members

MMP0102 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) Details for MMP0102 - Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) GO Terms: GO:0006464, GO:0004719 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0102 Tuberculist Genomic Region	MMP0785 Chymotrypsin serine protease, family S1 (NCBI) Details for MMP0785 - Chymotrypsin serine protease, family S1 (NCBI) GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0785 Tuberculist Genomic Region
MMP0115 conserved hypothetical protein (NCBI) Details for MMP0115 - conserved hypothetical protein (NCBI) GO Terms: GO:0006118, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0115 Tuberculist Genomic Region	MMP0863 CBS domain (NCBI) Details for MMP0863 - CBS domain (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0863 Tuberculist Genomic Region
MMP0182 hypothetical protein (NCBI) Details for MMP0182 - hypothetical protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0182 Tuberculist Genomic Region	MMP1012 exonuclease III (NCBI) Details for MMP1012 - exonuclease III (NCBI) GO Terms: GO:0006281, GO:0005622, GO:0004519, GO:0003677, GO:0008853 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1012 Tuberculist Genomic Region
MMP0305 oxidoreductase family member subunit beta (NCBI) Details for MMP0305 - oxidoreductase family member subunit beta (NCBI) GO Terms: GO:0047553, GO:0030976 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0305 Tuberculist Genomic Region	MMP1059 conserved hypothetical protein (NCBI) Details for MMP1059 - conserved hypothetical protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1059 Tuberculist Genomic Region
MMP0306 oxidoreductase family member subunit alpha (NCBI) Details for MMP0306 - oxidoreductase family member subunit alpha (NCBI) GO Terms: GO:0006118, GO:0047553 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0306 Tuberculist Genomic Region	MMP1331 conserved hypothetical protein (NCBI) Details for MMP1331 - conserved hypothetical protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1331 Tuberculist Genomic Region
MMP0600 hypothetical protein (NCBI) Details for MMP0600 - hypothetical protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0600 Tuberculist Genomic Region	MMP1332 NAD binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase (NCBI) Details for MMP1332 - NAD binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase (NCBI) GO Terms: GO:0006118, GO:0004148, GO:0050660 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1332 Tuberculist Genomic Region
MMP0720 hydroxylamine reductase (RefSeq) Details for MMP0720 - hydroxylamine reductase (RefSeq) GO Terms: GO:0006118, GO:0005737, GO:0016661, GO:0051536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP0720 Tuberculist Genomic Region	MMP1338 hypothetical protein (NCBI) Details for MMP1338 - hypothetical protein (NCBI) GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: MMP1338 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.00077 Motif 2:

e-value: 1800

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
H2	down-regulates	-0.52	H2
MMP0086 LuxR family member (NCBI)	up-regulates	0.33	MMP0086
MMP0032 ArsR family member (NCBI)	up-regulates	0.26	MMP0032

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016491	oxidoreductase activity	78	0.81	5	0.0004
MF	GO:0016667	oxidoreductase activity, acting on a sul...	3	0.03	1	0.0308
MF	GO:0003824	catalytic activity	298	3.08	6	0.0406
MF	GO:0016651	oxidoreductase activity, acting on NAD(P...	4	0.04	1	0.0408

Essentiality

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