Methanococcus maripaludis S2 Module 24 Residual: 0.43

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Summary

Residual: 0.43 Score: -11.2614 version: mmp_cmonkey_11_Oct_11

Members

MMP0076 conserved hypothetical protein (NCBI)

Details for MMP0076 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0076

Tuberculist Genomic Region

MMP1540 Conserved hypothetical Archael protein (NCBI)

Details for MMP1540 - Conserved hypothetical Archael protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1540

Tuberculist Genomic Region

MMP0134 Conserved hypothetical protein (NCBI)

Details for MMP0134 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0134

Tuberculist Genomic Region

MMP1541 conserved hypothetical archaeal protein (NCBI)

Details for MMP1541 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1541

Tuberculist Genomic Region

MMP0419 Sodium:neurotransmitter symporter (NCBI)

Details for MMP0419 - Sodium:neurotransmitter symporter (NCBI)

GO Terms: GO:0006836, GO:0005887, GO:0005328

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0419

Tuberculist Genomic Region

MMP1590 conserved hypothetical protein (NCBI)

Details for MMP1590 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1590

Tuberculist Genomic Region

MMP0637 Transcriptional regulator, ArsR family member (NCBI)

Details for MMP0637 - Transcriptional regulator, ArsR family member (NCBI)

GO Terms: GO:0006355, GO:0016481, GO:0005622, GO:0003700, GO:0016566

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0637

Tuberculist Genomic Region

MMP0319 precorrin-2 C-20 methyltransferase (NCBI)

Details for MMP0319 - precorrin-2 C-20 methyltransferase (NCBI)

GO Terms: GO:0009236, GO:0030788, GO:0043781

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0319

Tuberculist Genomic Region

MMP0655 hypothetical protein (NCBI)

Details for MMP0655 - hypothetical protein (NCBI)

GO Terms: GO:0006790

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0655

Tuberculist Genomic Region

MMP0340 pyruvate carboxylase subunit B (NCBI)

Details for MMP0340 - pyruvate carboxylase subunit B (NCBI)

GO Terms: GO:0006814, GO:0008152, GO:0004736, GO:0008948

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0340

Tuberculist Genomic Region

MMP0679 Na+/H+ Antiporter related protein (NCBI)

Details for MMP0679 - Na+/H+ Antiporter related protein (NCBI)

GO Terms: GO:0006814, GO:0006885, GO:0016021, GO:0015385

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0679

Tuberculist Genomic Region

MMP0702 conserved hypothetical protein (NCBI)

Details for MMP0702 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006464, GO:0003824, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0702

Tuberculist Genomic Region

MMP0715 coenzyme F390 synthetase II (NCBI)

Details for MMP0715 - coenzyme F390 synthetase II (NCBI)

GO Terms: GO:0008152, GO:0047475

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0715

Tuberculist Genomic Region

MMP0713 indolepyruvate oxidoreductase subunit alpha 2 (NCBI)

Details for MMP0713 - indolepyruvate oxidoreductase subunit alpha 2 (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055, GO:0030976, GO:0043805

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0713

Tuberculist Genomic Region

MMP0814 hypothetical protein (NCBI)

Details for MMP0814 - hypothetical protein (NCBI)

GO Terms: GO:0005618

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0814

Tuberculist Genomic Region

MMP0714 indolepyruvate oxidoreductase subunit beta 2 (NCBI)

Details for MMP0714 - indolepyruvate oxidoreductase subunit beta 2 (NCBI)

GO Terms: GO:0006118, GO:0005524, GO:0043805

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0714

Tuberculist Genomic Region

MMP0815 conserved hypothetical protein (NCBI)

Details for MMP0815 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006825, GO:0042597, GO:0005507

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0815

Tuberculist Genomic Region

MMP0953 precorrin-3B C17-methyltransferase (NCBI)

Details for MMP0953 - precorrin-3B C17-methyltransferase (NCBI)

GO Terms: GO:0009236, GO:0030789

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0953

Tuberculist Genomic Region

MMP0880 2-oxosuberate synthase, last step (NCBI)

Details for MMP0880 - 2-oxosuberate synthase, last step (NCBI)

GO Terms: GO:0009098, GO:0003862, GO:0051287

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0880

Tuberculist Genomic Region

MMP1017 Aspartate kinase (NCBI)

Details for MMP1017 - Aspartate kinase (NCBI)

GO Terms: GO:0008652, GO:0016597, GO:0004072

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1017

Tuberculist Genomic Region

MMP1270 Orotidine 5'-phosphate decarboxylase (NCBI)

Details for MMP1270 - Orotidine 5'-phosphate decarboxylase (NCBI)

GO Terms: GO:0005975, GO:0006207, GO:0004750, GO:0004590

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1270

Tuberculist Genomic Region

MMP1363 RNA polymerase, alpha subunit (NCBI)

Details for MMP1363 - RNA polymerase, alpha subunit (NCBI)

GO Terms: GO:0006350, GO:0005634, GO:0003902, GO:0003901, GO:0003677, GO:0003900, GO:0008270, GO:0003899

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1363

Tuberculist Genomic Region

MMP1537 Cytochrome c heme-binding site (NCBI)

Details for MMP1537 - Cytochrome c heme-binding site (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1537

Tuberculist Genomic Region

MMP1659 Aspartate carbamoyltransferase; catalytic subunit (NCBI)

Details for MMP1659 - Aspartate carbamoyltransferase; catalytic subunit (NCBI)

GO Terms: GO:0006207, GO:0006520, GO:0016597, GO:0004070

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1659

Tuberculist Genomic Region

MMP1538 predicted transporter component (NCBI)

Details for MMP1538 - predicted transporter component (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1538

Tuberculist Genomic Region

Displaying 1 - 25 of 25

Motifs

Motif 1: e-value: 0.00047 e-value: 4300

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.28

MMP0907

MMP1646

MMP1704

conserved hypothetical archeal protein (NCBI)
 up-regulates 0.27

MMP1704

MMP1499

conserved hypothetical archaeal protein (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.20

MMP1499

MMP1646

MMP1065

conserved hypothetical archaeal protein (NCBI)
 down-regulates -0.14

MMP1065

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006725 cellular aromatic compound metabolic pro... 87 2.27 5 0.0180
BP GO:0044281 small molecule metabolic process 87 2.27 5 0.0180
BP GO:1901360 organic cyclic compound metabolic proces... 96 2.50 5 0.0300
BP GO:0044710 single-organism metabolic process 99 2.58 5 0.0350
BP GO:0072527 pyrimidine-containing compound metabolic... 13 0.34 2 0.0380
BP GO:0072528 pyrimidine-containing compound biosynthe... 13 0.34 2 0.0380
BP GO:0044271 cellular nitrogen compound biosynthetic ... 64 1.67 4 0.0430

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