Methanococcus maripaludis S2 Module 47 Residual: 0.27

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Summary

Residual: 0.27 Score: -18.0677 version: mmp_cmonkey_11_Oct_11

Members

MMP0291 hydrogenase expression/formation protein related (NCBI)

Details for MMP0291 - hydrogenase expression/formation protein related (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0291

Tuberculist Genomic Region

MMP1117 conserved hypothetical protein (NCBI)

Details for MMP1117 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1117

Tuberculist Genomic Region

MMP0320 shikimate kinase (archaeal) (NCBI)

Details for MMP0320 - shikimate kinase (archaeal) (NCBI)

GO Terms: GO:0016310, GO:0009073, GO:0005737, GO:0004765, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0320

Tuberculist Genomic Region

MMP1128 Peptidyl-prolyl cis-trans isomerase, cyclophilin type (NCBI)

Details for MMP1128 - Peptidyl-prolyl cis-trans isomerase, cyclophilin type (NCBI)

GO Terms: GO:0006457, GO:0030051, GO:0042027, GO:0003755, GO:0004600

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1128

Tuberculist Genomic Region

MMP0415 Eukaryotic protein kinase:Glycoprotease (M22) metalloprotease:Tyrosine protein kinase (NCBI)

Details for MMP0415 - Eukaryotic protein kinase:Glycoprotease (M22) metalloprotease:Tyrosine protein kinase (NCBI)

GO Terms: GO:0006508, GO:0006468, GO:0009103, GO:0016020, GO:0004674, GO:0004713, GO:0008270, GO:0005524, GO:0008450

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0415

Tuberculist Genomic Region

MMP1287 Protein of unknown function UPF0058 (NCBI)

Details for MMP1287 - Protein of unknown function UPF0058 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1287

Tuberculist Genomic Region

MMP0582 AzlC related protein (NCBI)

Details for MMP0582 - AzlC related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0582

Tuberculist Genomic Region

MMP1288

Details for MMP1288 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1288

Tuberculist Genomic Region

MMP0681 Xanthine/uracil permease family (NCBI)

Details for MMP0681 - Xanthine/uracil permease family (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0681

Tuberculist Genomic Region

MMP1313 flap endonuclease (NCBI)

Details for MMP1313 - flap endonuclease (NCBI)

GO Terms: GO:0006281, GO:0005634, GO:0004518, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1313

Tuberculist Genomic Region

MMP0713 indolepyruvate oxidoreductase subunit alpha 2 (NCBI)

Details for MMP0713 - indolepyruvate oxidoreductase subunit alpha 2 (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055, GO:0030976, GO:0043805

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0713

Tuberculist Genomic Region

MMP1350 conserved hypothetical protein (NCBI)

Details for MMP1350 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0046872, GO:0051536, GO:0003824, GO:0031419

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1350

Tuberculist Genomic Region

MMP0714 indolepyruvate oxidoreductase subunit beta 2 (NCBI)

Details for MMP0714 - indolepyruvate oxidoreductase subunit beta 2 (NCBI)

GO Terms: GO:0006118, GO:0005524, GO:0043805

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0714

Tuberculist Genomic Region

MMP1648 conserved hypothetical protein (NCBI)

Details for MMP1648 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1648

Tuberculist Genomic Region

MMP0938 cobalamin (5'-phosphate) synthase (NCBI)

Details for MMP0938 - cobalamin (5'-phosphate) synthase (NCBI)

GO Terms: GO:0009236, GO:0051073, GO:0008818

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0938

Tuberculist Genomic Region

MMP1143 TPR repeat (NCBI)

Details for MMP1143 - TPR repeat (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1143

Tuberculist Genomic Region

MMP0970 ATP-dependent DNA ligase (NCBI)

Details for MMP0970 - ATP-dependent DNA ligase (NCBI)

GO Terms: GO:0006281, GO:0006260, GO:0006310, GO:0005524, GO:0003677, GO:0003910

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0970

Tuberculist Genomic Region

MMP1348 Conserved hypothetical protein (NCBI)

Details for MMP1348 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0009231, GO:0006304, GO:0003676, GO:0050661, GO:0008703

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1348

Tuberculist Genomic Region

MMP1024 MCM family related protein (NCBI)

Details for MMP1024 - MCM family related protein (NCBI)

GO Terms: GO:0006270, GO:0005524, GO:0008094, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1024

Tuberculist Genomic Region

Displaying 1 - 19 of 19

Motifs

Motif 1: e-value: 390 e-value: 4000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0033

LysR family member (NCBI)
 up-regulates 0.29

MMP0033

MMP0033

LysR family member (NCBI)

MMP0629

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.24

MMP0033

MMP0629

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)
 up-regulates 0.21

MMP0907

MMP1023

MMP1704

conserved hypothetical archeal protein (NCBI)
 up-regulates 0.13

MMP1704

MMP0629

conserved hypothetical archaeal protein (NCBI)

MMP1499

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.13

MMP0629

MMP1499

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0044272 sulfur compound biosynthetic process 7 0.04 1 0.0360
BP GO:0006790 sulfur compound metabolic process 8 0.04 1 0.0420

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