Methanococcus maripaludis S2 Module 55 Residual: 0.31

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Summary

Residual: 0.31 Score: -18.8322 version: mmp_cmonkey_11_Oct_11

Members

MMP0120 conserved hypothetical protein (NCBI)

Details for MMP0120 - conserved hypothetical protein (NCBI)

GO Terms: GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0120

Tuberculist Genomic Region

MMP1551 signal recognition particle protein SRP54 (NCBI)

Details for MMP1551 - signal recognition particle protein SRP54 (NCBI)

GO Terms: GO:0006614, GO:0048500, GO:0016020, GO:0008312, GO:0017111, GO:0005525

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1551

Tuberculist Genomic Region

MMP0121 hypothetical (NCBI)

Details for MMP0121 - hypothetical (NCBI)

GO Terms: GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0121

Tuberculist Genomic Region

MMP1607 Protein of unknown function DUF99 (NCBI)

Details for MMP1607 - Protein of unknown function DUF99 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1607

Tuberculist Genomic Region

MMP0543 conserved hypothetical protein (NCBI)

Details for MMP0543 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0543

Tuberculist Genomic Region

MMP0482 conserved hypothetical protein (NCBI)

Details for MMP0482 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0482

Tuberculist Genomic Region

MMP0544 MoaA/nifB/pqqE family (NCBI)

Details for MMP0544 - MoaA/nifB/pqqE family (NCBI)

GO Terms: GO:0008152, GO:0043365, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0544

Tuberculist Genomic Region

MMP0483 conserved hypothetical protein (NCBI)

Details for MMP0483 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0483

Tuberculist Genomic Region

MMP0545 Molybdenum cofactor biosynthesis protein:MoeA N-terminal region, domain I and II:MoeA C-terminal, domain IV (NCBI)

Details for MMP0545 - Molybdenum cofactor biosynthesis protein:MoeA N-terminal region, domain I and II:MoeA C-terminal, domain IV (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0545

Tuberculist Genomic Region

MMP0638 conserved hypothetical protein (NCBI)

Details for MMP0638 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0638

Tuberculist Genomic Region

MMP0992 conserved hypothetical archaeal protein (NCBI)

Details for MMP0992 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0992

Tuberculist Genomic Region

MMP0902 Protein of unknown function DUF126 (NCBI)

Details for MMP0902 - Protein of unknown function DUF126 (NCBI)

GO Terms: GO:0016310, GO:0016772

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0902

Tuberculist Genomic Region

MMP1065 conserved hypothetical archaeal protein (NCBI)

Details for MMP1065 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006355, GO:0005622, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1065

Tuberculist Genomic Region

MMP1240 conserved hypothetical protein (NCBI)

Details for MMP1240 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009058, GO:0030170, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1240

Tuberculist Genomic Region

MMP1235 Molybdopterin biosynthesis MoaE (NCBI)

Details for MMP1235 - Molybdopterin biosynthesis MoaE (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1235

Tuberculist Genomic Region

MMP0903 hypothetical protein (NCBI)

Details for MMP0903 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0903

Tuberculist Genomic Region

MMP1241 conserved hypothetical protein (NCBI)

Details for MMP1241 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1241

Tuberculist Genomic Region

MMP1234 conserved hypothetical membrane related protein (NCBI)

Details for MMP1234 - conserved hypothetical membrane related protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1234

Tuberculist Genomic Region

MMP1428 hypothetical protein (NCBI)

Details for MMP1428 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1428

Tuberculist Genomic Region

MMP1236 conserved hypothetical protein (NCBI)

Details for MMP1236 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009228

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1236

Tuberculist Genomic Region

MMP1487 Aldehyde dehydrogenase (NCBI)

Details for MMP1487 - Aldehyde dehydrogenase (NCBI)

GO Terms: GO:0008152, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1487

Tuberculist Genomic Region

Displaying 1 - 21 of 21

Motifs

Motif 1: e-value: 24 e-value: 1600

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)
 down-regulates -0.24

MMP0907

MMP1023

MMP1447

Cro repressor family Helix-turn-helix motif containing protein (NCBI)
 up-regulates 0.21

MMP1447

MMP0527

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.18

MMP0527

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 down-regulates -0.15

MMP0907

MMP1646

MMP0460

Conserved Hypothetical Protein (NCBI)
 up-regulates 0.12

MMP0460

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)
 down-regulates -0.11

MMP1023

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic p... 7 0.11 2 0.0034
BP GO:0019720 Mo-molybdopterin cofactor metabolic proc... 7 0.11 2 0.0034
BP GO:0032324 molybdopterin cofactor biosynthetic proc... 7 0.11 2 0.0034
BP GO:0043545 molybdopterin cofactor metabolic process 7 0.11 2 0.0034
BP GO:0051189 prosthetic group metabolic process 7 0.11 2 0.0034
BP GO:0006796 phosphate-containing compound metabolic ... 43 0.67 3 0.0106
BP GO:0006793 phosphorus metabolic process 44 0.69 3 0.0114
BP GO:0019538 protein metabolic process 13 0.20 2 0.0123
BP GO:0044267 cellular protein metabolic process 13 0.20 2 0.0123
BP GO:0009108 coenzyme biosynthetic process 14 0.22 2 0.0143
BP GO:0006732 coenzyme metabolic process 17 0.27 2 0.0211
BP GO:0051188 cofactor biosynthetic process 19 0.30 2 0.0263
BP GO:0051186 cofactor metabolic process 22 0.34 2 0.0351
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016620 oxidoreductase activity, acting on the a... 5 0.05 1 0.0446
MF GO:0016765 transferase activity, transferring alkyl... 5 0.05 1 0.0446

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