Methanococcus maripaludis S2 Module 81 Residual: 0.26

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Summary

Residual: 0.26 Score: -15.7581 version: mmp_cmonkey_11_Oct_11

Members

MMP0212 glycyl-tRNA synthetase (NCBI)

Details for MMP0212 - glycyl-tRNA synthetase (NCBI)

GO Terms: GO:0006426, GO:0009345, GO:0004820, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0212

Tuberculist Genomic Region

MMP1427 Conserved Hypothetical Protein (NCBI)

Details for MMP1427 - Conserved Hypothetical Protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1427

Tuberculist Genomic Region

MMP0414 Threonyl-tRNA synthetase (NCBI)

Details for MMP0414 - Threonyl-tRNA synthetase (NCBI)

GO Terms: GO:0006435, GO:0005737, GO:0005524, GO:0004829

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0414

Tuberculist Genomic Region

MMP0297 translation initiation factor aIF-2 subunit beta (NCBI)

Details for MMP0297 - translation initiation factor aIF-2 subunit beta (NCBI)

GO Terms: GO:0006413, GO:0003743

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0297

Tuberculist Genomic Region

MMP0550 similar to ABC-type amino acid transport system, periplasmic component (NCBI)

Details for MMP0550 - similar to ABC-type amino acid transport system, periplasmic component (NCBI)

GO Terms: GO:0006810, GO:0030288, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0550

Tuberculist Genomic Region

MMP0588 Diphthine synthase (NCBI)

Details for MMP0588 - Diphthine synthase (NCBI)

GO Terms: GO:0017183, GO:0004164

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0588

Tuberculist Genomic Region

MMP0946 Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit B (NCBI)

Details for MMP0946 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit B (NCBI)

GO Terms: GO:0006412, GO:0050567, GO:0050566

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0946

Tuberculist Genomic Region

MMP0596 RNA 2'-O-methyl modification protein (NOP5/NOP56) (NCBI)

Details for MMP0596 - RNA 2'-O-methyl modification protein (NOP5/NOP56) (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0596

Tuberculist Genomic Region

MMP1063 2-isopropylmalate synthase (NCBI)

Details for MMP1063 - 2-isopropylmalate synthase (NCBI)

GO Terms: GO:0019752, GO:0003852

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1063

Tuberculist Genomic Region

MMP0597 Fibrillarin (NCBI)

Details for MMP0597 - Fibrillarin (NCBI)

GO Terms: GO:0006364, GO:0005634, GO:0003723, GO:0004682

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0597

Tuberculist Genomic Region

MMP1068 K+-dependent Na+/Ca+ exchanger related-protein:Sodium/calcium exchanger membrane region (NCBI)

Details for MMP1068 - K+-dependent Na+/Ca+ exchanger related-protein:Sodium/calcium exchanger membrane region (NCBI)

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1068

Tuberculist Genomic Region

MMP0899 ATP/GTP-binding site motif A (P-loop) (NCBI)

Details for MMP0899 - ATP/GTP-binding site motif A (P-loop) (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0899

Tuberculist Genomic Region

MMP1105 succinate-CoA ligase (ADP-forming), beta chain (NCBI)

Details for MMP1105 - succinate-CoA ligase (ADP-forming), beta chain (NCBI)

GO Terms: GO:0008152, GO:0009361, GO:0005524, GO:0004775

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1105

Tuberculist Genomic Region

MMP0900 Rhodanese-like (NCBI)

Details for MMP0900 - Rhodanese-like (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0900

Tuberculist Genomic Region

MMP1106 hypothetical protein (NCBI)

Details for MMP1106 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1106

Tuberculist Genomic Region

MMP1131 peptide chain release factor aRF, subunit 1 (NCBI)

Details for MMP1131 - peptide chain release factor aRF, subunit 1 (NCBI)

GO Terms: GO:0006415, GO:0005737, GO:0008547, GO:0016149, GO:0003924

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1131

Tuberculist Genomic Region

MMP1353 conserved hypothetical protein (NCBI)

Details for MMP1353 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1353

Tuberculist Genomic Region

MMP1242 Quinolinate synthetase A (NCBI)

Details for MMP1242 - Quinolinate synthetase A (NCBI)

GO Terms: GO:0009435, GO:0008987, GO:0003908

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1242

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 0.64 e-value: 19000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP1467

conserved hypothetical protein (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.50

MMP1467

MMP1646

MMP0020

conserved hypothetical protein (NCBI)
 down-regulates -0.42

MMP0020

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP1100

putative transricptional regulator (NCBI)
 up-regulates 0.36

MMP0168

MMP1100

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 down-regulates -0.31

MMP1015

H2

 up-regulates 0.24

H2

MMP0020

conserved hypothetical protein (NCBI)

MMP0752

conserved archaeal hypothetical protein (NCBI)
 up-regulates 0.21

MMP0020

MMP0752

MMP0020

conserved hypothetical protein (NCBI)

MMP0791

Transcriptional regulator, TetR Family Member (NCBI)
 down-regulates -0.14

MMP0020

MMP0791

MMP1376

conserved hypothetical protein (NCBI)
 down-regulates -0.13

MMP1376

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)
 down-regulates -0.11

MMP0052

GO Enrichment

Category:
Annotated

Comments

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