Methanococcus maripaludis S2 Module 102 Residual: 0.19

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Summary

Residual: 0.19 Score: -22.0846 version: mmp_cmonkey_11_Oct_11

Members

MMP1124 AIR synthase related protein (NCBI)

Details for MMP1124 - AIR synthase related protein (NCBI)

GO Terms: GO:0009228, GO:0009030

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1124

Tuberculist Genomic Region

MMP0569 conserved hypothetical protein (NCBI)

Details for MMP0569 - conserved hypothetical protein (NCBI)

GO Terms: GO:0005618

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0569

Tuberculist Genomic Region

MMP1282 Conseved hypothetical protein NTP-binding (NCBI)

Details for MMP1282 - Conseved hypothetical protein NTP-binding (NCBI)

GO Terms: GO:0019205

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1282

Tuberculist Genomic Region

MMP0958 conserved hypothetical protein (NCBI)

Details for MMP0958 - conserved hypothetical protein (NCBI)

GO Terms: GO:0045454, GO:0006662, GO:0015035, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0958

Tuberculist Genomic Region

MMP1283 conserved hypothetical archaeal protein (NCBI)

Details for MMP1283 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1283

Tuberculist Genomic Region

MMP0959 thioredoxin reductase (NCBI)

Details for MMP0959 - thioredoxin reductase (NCBI)

GO Terms: GO:0006118, GO:0004791

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0959

Tuberculist Genomic Region

MMP0122 conserved hypothetical protein (NCBI)

Details for MMP0122 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0122

Tuberculist Genomic Region

MMP1001 conserved hypothetical protein (NCBI)

Details for MMP1001 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1001

Tuberculist Genomic Region

MMP0425 Conserved hypothetical protein (NCBI)

Details for MMP0425 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0009396, GO:0005524, GO:0030272

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0425

Tuberculist Genomic Region

MMP1052 conserved hypothetical archaeal protein (NCBI)

Details for MMP1052 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006355, GO:0005622, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1052

Tuberculist Genomic Region

MMP0426 Nitroreductase family (NCBI)

Details for MMP0426 - Nitroreductase family (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0426

Tuberculist Genomic Region

MMP1060 Cysteinyl-tRNA synthetase (NCBI)

Details for MMP1060 - Cysteinyl-tRNA synthetase (NCBI)

GO Terms: GO:0006423, GO:0005737, GO:0005524, GO:0004817

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1060

Tuberculist Genomic Region

MMP0465 conserved hypothetical archaeal protein (NCBI)

Details for MMP0465 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0465

Tuberculist Genomic Region

MMP1514 Prephenate dehydrogenase (NCBI)

Details for MMP1514 - Prephenate dehydrogenase (NCBI)

GO Terms: GO:0006571, GO:0006432, GO:0006118, GO:0008033, GO:0008977, GO:0000049, GO:0005524, GO:0004826, GO:0004665, GO:0000287

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1514

Tuberculist Genomic Region

MMP0534 conserved hypothetical protein (NCBI)

Details for MMP0534 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0534

Tuberculist Genomic Region

MMP1598 conserved hypothetical protein (NCBI)

Details for MMP1598 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1598

Tuberculist Genomic Region

MMP0535 conserved hypothetical archaeal protein (NCBI)

Details for MMP0535 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0535

Tuberculist Genomic Region

Displaying 1 - 17 of 17

Motifs

Motif 1: e-value: 16000 e-value: 22000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP1499

conserved hypothetical archaeal protein (NCBI)

H2

 down-regulates -0.18

MMP1499

H2

MMP1065

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.17

MMP1065

MMP0907

predicted archaeal transcriptional regulator (NCBI)

H2

 down-regulates -0.14

MMP0907

H2

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 up-regulates 0.14

MMP1015

MMP0678

Predicted transcriptional regulator; Helix-turn-helix motif (NCBI)
 up-regulates 0.10

MMP0678

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0045454 cell redox homeostasis 4 0.04 1 0.0410
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0043168 anion binding 196 1.27 4 0.0160
MF GO:0000166 nucleotide binding 200 1.29 4 0.0170
MF GO:1901265 nucleoside phosphate binding 200 1.29 4 0.0170
MF GO:0036094 small molecule binding 210 1.36 4 0.0210
MF GO:0043167 ion binding 220 1.42 4 0.0250
MF GO:0050660 flavin adenine dinucleotide binding 4 0.03 1 0.0260

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