Module_65 |
25
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein, DUF1904 family | Pathway: | COG: Function unknown
Product:Putative transporter | Pathway: | COG: Function unknown
Product:Putative lipoprotein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Putative diguanylate kinase signaling protein | Pathway: | COG: Signal transduction mechanisms
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Transcriptional regulator, ArsR family | Pathway: | COG: Function unknown
Product:Aminopeptidase | Pathway: | COG: Amino acid transport and metabolism
Product:Ribosomal small subunit pseudouridine synthase A | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Putative hydrolase, CocE/NonD family | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Putative conjugative transposon proteinTn1549-like, CTn2-Orf17 | Pathway: | COG: Function unknown
Product:Transcriptional regulator, MarR family | Pathway: | COG: Transcription
Product:Transcriptional regulator, HTH-type | Pathway: | COG: Transcription
Product:UDP-N-acetylmuramate--L-alanine ligase(UDP-N-acetylmuramoyl-L-alanine synthetase) | Pathway: Cell wall biogenesis | COG: Cell wall/membrane/envelope biogenesis
Product:Putative PTS system, EIIC component | Pathway: | COG: Function unknown
Product:Putative thiosulfate sulfurtransferase | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Putative regulatory endoribonuclease | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:L-serine dehydratase | Pathway: | COG: Amino acid transport and metabolism
|
0.00000000000036 |
|
0.0000005 |
|
0.39 |
|
Inferelator: 2
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, beta-lactamsrepressor | Pathway: | COG: Transcription
Product:Clostridium difficile binary toxin regulatorygene, LytTR family | Pathway: | COG: Signal transduction mechanisms
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_82 |
31
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Transcriptional regulator, CarD family | Pathway: | COG: Transcription
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative glucokinase, ROK family | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative calcium-transporting ATPase | Pathway: | COG: Inorganic ion transport and metabolism
Product:Alanine racemase 2 | Pathway: Amino-acid biosynthesis | COG: Cell wall/membrane/envelope biogenesis
Product:Stage IV sporulation protein A | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative peptidase T, M20B family | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system,lantibiotic/multidrug-family ATP-binding protein | Pathway: | COG: Defense mechanisms
Product:Spore coat protein CotE; peroxiredoxin/chitinase | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative antitoxin EndoAI | Pathway: | COG: Transcription
Product:Germination-specific N-acetylmuramoyl-L-alanineamidase, Autolysin | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Putative synthetase | Pathway: | COG: Secondary metabolites biosynthesis, transport and catabolism
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Putative membrane protein, DUF975 family | Pathway: | COG: Function unknown
Product:Holo-[acyl-carrier-protein] synthase | Pathway: | COG: Lipid transport and metabolism
Product:Stage V sporulation protein D(Sporulation-specific penicillin-binding protein) | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Clostridium difficile exosporium cycteine-richprotein | Pathway: | COG:
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Serine-type D-Ala-D-Ala carboxypeptidase | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Putative cation efflux protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Lipoprotein regulator, germination | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Spore outer coat layer protein CotB | Pathway: | COG: Function unknown
Product:Putative transmembrane signaling protein,TspO/MBR family | Pathway: | COG: Signal transduction mechanisms
Product:Endoribonuclease toxin | Pathway: | COG: Signal transduction mechanisms
Product:Putative cell wall-binding protein | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative lipoprotein | Pathway: | COG:
|
0.0000000013 |
|
NA |
|
0.39 |
|
Inferelator: 1
Hypergeometric: 2
TF Influences from Inferelator
Product:Stage V sporulation protein T | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
Product:Stage 0 sporulation protein A | Pathway: | COG: Signal transduction mechanisms
Product:RNA polymerase sigma-E factor | Pathway: | COG: Transcription
|
Module_3 |
24
Product:ABC-type transport system, multidrug-familyATP-binding protein | Pathway: | COG: Function unknown
Product:ABC-type transport system, multidrug-familypermease | Pathway: | COG: Function unknown
Product:Leucine aminopeptidase | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system, multidrug-familypermease | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:PTS system, lactose/cellobiose-family IIBcomponent | Pathway: | COG: Carbohydrate transport and metabolism
Product:PTS system, tagatose-specific IIABC component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Acetylglutamate kinase | Pathway: Amino-acid biosynthesis | COG: Amino acid transport and metabolism
Product:ABC-type transport system, multidrug-familyATP-binding protein | Pathway: | COG: Defense mechanisms
Product:Transcriptional regulator, RpiR family | Pathway: | COG: Transcription
Product:ABC-type transport system, ATP-binding protein | Pathway: | COG: Function unknown
Product:N-acetyl-gamma-glutamyl-phosphate reductase | Pathway: Amino-acid biosynthesis | COG: Amino acid transport and metabolism
Product:ABC-type transport system, multidrug-familypermease | Pathway: | COG: Function unknown
Product:Arginine biosynthesis bifunctional protein ArgJ[Includes: Glutamate N-acetyltransferase ; Amino-acidacetyltransferase] | Pathway: Amino-acid biosynthesis | COG: Amino acid transport and metabolism
Product:ABC-type transport system, multidrug-familypermease | Pathway: | COG: Function unknown
Product:PTS system, lactose/cellobiose-family IICcomponent | Pathway: | COG: Carbohydrate transport and metabolism
Product:Transcription antiterminator, PTS operonregulator | Pathway: | COG: Transcription
Product:6-phospho-beta-glucosidase | Pathway: | COG: Carbohydrate transport and metabolism
Product:Succinylornithine transaminase (ACOAT) | Pathway: Amino-acid biosynthesis | COG: Amino acid transport and metabolism
Product:Transcriptional regulator, MarR family | Pathway: | COG: Transcription
Product:tagatose-bisphosphate aldolase | Pathway: | COG: Carbohydrate transport and metabolism
Product:Ornithine carbamoyltransferase (OTCase) | Pathway: | COG: Amino acid transport and metabolism
Product:Tagatose-6-phosphate kinase | Pathway: Carbohydrate metabolism | COG: Carbohydrate transport and metabolism
|
0.01 |
|
0.64 |
|
0.39 |
|
Inferelator: 3
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, AraC family | Pathway: | COG: Transcription
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
Product:Transcriptional regulator, LysR family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_243 |
21
Product:L-seryl-tRNA(Sec) selenium transferase(Selenocysteine synthase) (Sec synthase)(Selenocysteinyl-tRNA(Sec) synthase ) | Pathway: Aminoacyl-tRNA biosynthesis | COG: Amino acid transport and metabolism
Product:D-alanyl-D-alanine carboxypeptidase (putativesporulation-specific penicillin-binding protein) | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Selenocysteinyl-tRNA-specific translation factor | Pathway: | COG: Translation, ribosomal structure and biogenesis
Product:Ribose-phosphate pyrophosphokinase | Pathway: Metabolic intermediate biosynthesis | COG: Nucleotide transport and metabolism
Product:60 kDa chaperonin (Protein Cpn60) (GroELprotein) | Pathway: | COG: Posttranslational modification, protein turnover, chaperones
Product:Nicotinate-nucleotide adenylyltransferase | Pathway: Cofactor biosynthesis | COG: Coenzyme transport and metabolism
Product:Competence protein ComEA | Pathway: | COG: Replication, recombination and repair
Product:Putative hydrolase | Pathway: | COG: Coenzyme transport and metabolism
Product:Selenide, water dikinase (Selenophosphatesynthetase) (Selenium donor protein) | Pathway: | COG: Amino acid transport and metabolism
Product:Putative regulator of the sigma(E) factor | Pathway: | COG: Signal transduction mechanisms
Product:10 kDa chaperonin (Protein Cpn10) (GroESprotein) | Pathway: | COG: Posttranslational modification, protein turnover, chaperones
Product:ABC-type transport system,cystine/aminoacid-family extracellular solute-bindingprotein | Pathway: | COG: Amino acid transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:ABC-type transport system,cystine/aminoacid-family permease | Pathway: | COG: Amino acid transport and metabolism
Product:Bifunctional protein GlmU [Includes:UDP-N-acetylglucosamine pyrophosphorylase ;Glucosamine-1-phosphate N-acetyltransferase] | Pathway: Nucleotide-sugar biosynthesis | COG: Cell wall/membrane/envelope biogenesis
Product:Putative membrane protein | Pathway: | COG:
Product:ABC-type transport system,cystine/aminoacid-family ATP-binding protein | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system,cystine/aminoacid-family permease | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system,cystine/aminoacid-family extracellular solute-bindingprotein | Pathway: | COG: Amino acid transport and metabolism, Signal transduction mechanisms
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative peptidase, M20D family | Pathway: | COG: Amino acid transport and metabolism
|
1.2 |
|
NA |
|
0.39 |
|
Inferelator: 1
Hypergeometric: 1
TF Influences from Inferelator
Product:Two-component response regulator | Pathway: | COG: Signal transduction mechanisms
TF Influences from Hypergeometric Test
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
|
Module_56 |
21
Product:Putative phage protein | Pathway: | COG: Function unknown
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG: Function unknown
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage DNA modification methylase | Pathway: | COG: Replication, recombination and repair
Product:Putative S-adenosyl-L-methionine-dependentmethyltransferase | Pathway: | COG: Replication, recombination and repair
Product:Putative phage protein | Pathway: | COG: Function unknown
Product:Putative phage recombination protein Bet | Pathway: | COG: Replication, recombination and repair
Product:Putative phage reductase | Pathway: | COG: Function unknown
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage endodeoxyribonuclease | Pathway: | COG: Replication, recombination and repair
Product:Putative phage anti-repressor | Pathway: | COG: Transcription
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage DNA-binding protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
Product:Putative phage protein | Pathway: | COG:
|
NA |
|
NA |
|
0.39 |
|
Inferelator: 2
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, HTH-type | Pathway: | COG: Transcription
Product:Two-component response regulator | Pathway: | COG: Signal transduction mechanisms
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_186 |
29
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG:
Product:Anaerobic nitric oxide reductase flavorubredoxin(FlRd) (FlavoRb) | Pathway: | COG: Energy production and conversion
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Transcriptional regulator, LysR family | Pathway: | COG: Transcription
Product:PTS system, xyloside-specific IIB component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative rubrerythrin (Rr) | Pathway: | COG: Energy production and conversion
Product:Putative protease/amidase | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Putative radical SAM superfamily protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG:
Product:PTS system, xyloside-specific IIA component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Transcriptional regulator, LexA repressor | Pathway: | COG: Transcription
Product:Putative nucleoside hydrolase, IUNH family | Pathway: | COG: Nucleotide transport and metabolism
Product:Glycosyl hydrolase | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:PTS system, EI component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative hydrolase, NUDIX family | Pathway: | COG: Replication, recombination and repair
Product:Putative 2-nitropropane dioxygenase | Pathway: | COG: Function unknown
Product:Putative drug/sodium antiporter, MATE family | Pathway: | COG: Defense mechanisms
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Tetracycline resistance protein Tn5397 | Pathway: | COG: Signal transduction mechanisms
Product:PTS system, xyloside-specific IID component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Putative membrane protein | Pathway: | COG: Function unknown
Product:Putative phage integrase | Pathway: | COG: Replication, recombination and repair
Product:PTS system, xyloside-specific IIC component | Pathway: | COG: Carbohydrate transport and metabolism
Product:Putative cell wall hydrolase | Pathway: | COG: Cell wall/membrane/envelope biogenesis
|
1.5e-32 |
|
NA |
|
0.40 |
|
Inferelator: 4
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, ArsR family | Pathway: | COG: Transcription
Product:Two-component response regulator | Pathway: | COG: Signal transduction mechanisms
Product:Transcriptional regulator, LysR family | Pathway: | COG: Transcription
Product:Putative cyclic nucleotides-binding protein | Pathway: | COG: Signal transduction mechanisms
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_372 |
7
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Glycerol kinase 1 (ATP:glycerol3-phosphotransferase 1) (Glycerokinase 1) (GK 1) | Pathway: Polyol metabolism | COG: Energy production and conversion
Product:Transcriptional regulator, GntR family | Pathway: | COG: Transcription
Product:Site-specific recombinase, resolvase family | Pathway: | COG: Replication, recombination and repair
Product:Transcriptional regulator, AraC family | Pathway: | COG: Transcription
Product:Two-component response regulator | Pathway: | COG: Signal transduction mechanisms
Product:Putative 3-methyladenine DNA glycosylase | Pathway: | COG: Replication, recombination and repair
|
5.8 |
|
NA |
|
0.40 |
|
Inferelator: 2
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, AraC family | Pathway: | COG: Transcription
Product:Transcriptional regulator, GntR family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_77 |
21
Product:ABC-type transport system, phosphonate-specificATP-binding protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:ABC-type transport system, cobalt-specificpermease Tn1549-like, CTn2-Orf25 | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative carbon-phosphorus lyase complex subunit | Pathway: | COG: Inorganic ion transport and metabolism
Product:ABC-type transport system, iron-familyATP-binding protein | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system, cobalt-specificATP-binding protein Tn1549-like, CTn2-Orf26 | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative DNA/RNA helicase Tn1549-like,CTn2-Orf18 | Pathway: | COG: Replication, recombination and repair
Product:Putative membrane protein Tn1549-like,CTn2-Orf24 | Pathway: | COG: Function unknown
Product:Putative endonuclease relaxase Tn1549-like,CTn2-Orf20 | Pathway: | COG: Intracellular trafficking, secretion, and vesicular transport
Product:Putative conjugative transposon proteinTn1549-like, CTn2-Orf21 | Pathway: | COG: Function unknown
Product:ABC-type transport system, multidrug-familypermease Tn1549-like, CTn2-Orf27 | Pathway: | COG: Defense mechanisms
Product:ABC-type transport system, phosphonate-specificATP-binding protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Branched-chain amino acid transport system IIcarrier protein | Pathway: | COG: Amino acid transport and metabolism
Product:ABC-type transport system, iron-familyextracellular solute-binding protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative drug/sodium antiporter, MATE family,Tn1549-like, CTn2-Orf29 | Pathway: | COG: Defense mechanisms
Product:Putative phosphonate metabolism protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:ABC-type transport system, iron-family permease | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative nucleic acid-binding proteinTn1549-like, CTn2-Orf19 | Pathway: | COG: Function unknown
Product:Putative polymerase/histidinol phosphatase-like | Pathway: | COG: Function unknown
Product:Putative phosphonate metabolism protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative phosphonate metabolism protein | Pathway: | COG: Inorganic ion transport and metabolism
Product:Putative phosphonate metabolism protein | Pathway: | COG: Inorganic ion transport and metabolism
|
NA |
|
NA |
|
0.40 |
|
Inferelator: 1
Hypergeometric: 0
TF Influences from Inferelator
Product:Transcriptional regulator, AraC family | Pathway: | COG: Transcription
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|
Module_129 |
24
Product:L,D-transpeptidases | Pathway: | COG: Function unknown
Product:Electron transport complex protein | Pathway: | COG: Energy production and conversion
Product:Conserved hypothetical protein | Pathway: | COG:
Product:Electron transport complex protein | Pathway: | COG: Energy production and conversion
Product:Glycine reductase complex component B gammasubunit (selenocysteine) | Pathway: | COG: Function unknown
Product:Putative competence-damage inducible protein,CinA family | Pathway: | COG: Coenzyme transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG: Replication, recombination and repair
Product:Putative cell-wall hydrolase | Pathway: | COG: Cell wall/membrane/envelope biogenesis
Product:Putative phosphatase | Pathway: | COG: Function unknown
Product:Glycine reductase complex component C subunitbeta (Protein PC beta) | Pathway: | COG: Energy production and conversion
Product:Transcriptional regulator, ArsR family | Pathway: | COG: Transcription
Product:Electron transport complex protein | Pathway: | COG: Energy production and conversion
Product:Putative hydrolase, HAD superfamily | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Conserved hypothetical protein | Pathway: | COG: Function unknown
Product:Electron transport complex protein | Pathway: | COG: Energy production and conversion
Product:Electron transport complex protein | Pathway: | COG: Energy production and conversion
Product:Phosphopantetheine adenylyltransferase(Pantetheine-phosphate adenylyltransferase) | Pathway: Cofactor biosynthesis | COG: Coenzyme transport and metabolism
Product:Putative dinitrogenase iron-molybdenum cofactor | Pathway: | COG: Function unknown
Product:Putative hydrolase, HAD superfamily, subfamilyIIB | Pathway: | COG: Function unknown
Product:ATP-dependent DNA helicase RecG | Pathway: | COG: Replication, recombination and repair
Product:Glycine reductase complex component C subunitalpha (Protein PC alpha) | Pathway: | COG: Function unknown
Product:Electron transport complex protein | Pathway: | COG: Energy production and conversion
|
0.06 |
|
NA |
|
0.40 |
|
Inferelator: 1
Hypergeometric: 1
TF Influences from Inferelator
Product:Putative dinitrogenase iron-molybdenum cofactor | Pathway: | COG: Function unknown
TF Influences from Hypergeometric Test
Product:Transcriptional regulator, sigma-54-dependent | Pathway: | COG: Transcription
|
Module_165 |
5
Product:Putative conjugative transposon proteinTn1549-like, CTn4-Orf5 | Pathway: | COG:
Product:PTS system, sorbitol-specific IIB C-terminalcomponent (Glucitol) | Pathway: | COG: Carbohydrate transport and metabolism
Product:Conserved hypothetical protein | Pathway: | COG:
Product:PTS system, sorbitol-specific IIB N-terminalcomponent (Glucitol) | Pathway: | COG: Carbohydrate transport and metabolism
Product:Fragment of putative conjugative transposonprotein Tn916-like, CTn6-Orf18 (N-terminal region) | Pathway: | COG: Function unknown
|
NA |
|
NA |
|
0.40 |
|
Inferelator: 1
Hypergeometric: 0
TF Influences from Inferelator
Product:Sorbitol operon activator protein (Glucitol) | Pathway: | COG: Function unknown
TF Influences from Hypergeometric Test
No TF Influences from the hypergeometric test
|