Cre01.g032300.t1.2 poly(A) binding protein 7

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g032300.t1.2 chromosome_1 poly(A) binding protein 7 CDS 4688013 4690979 - 2 966

Phytozome

Locus Genomic View Functional Annotation
Cre01.g032300.t1.2 Cre01.g032300.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GBP1 g731.t1, Cre01.g032300.t1.1 JGI146567 30789208 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0168
motif_0168_1

motif_0168_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.9
Motif Bicluster: 
bicluster_0168
Width: 
11
Number of Sites: 
1
Consensus: 
AATTcAtTTgT
motif_0168_2

motif_0168_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
67
Motif Bicluster: 
bicluster_0168
Width: 
24
Number of Sites: 
1
Consensus: 
cATCActctgtTaaGCAtTTTGcA
 0.19
bicluster_0171
motif_0171_1

motif_0171_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1500
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
CAnACTtgTAnTtcAaTnAAT
motif_0171_2

motif_0171_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
aGAgAAcAaaAtctAAgngAA
 0.17

GO Terms

GO:0003676 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI146567

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