Cre03.g159254.t2.1 ammonium transporter 1;1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g159254.t2.1 chromosome_3 ammonium transporter 1;1 CDS 2437793 2441852 + 4 059

Phytozome

Locus Genomic View Functional Annotation
Cre03.g159254.t2.1 Cre03.g159254.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g3261.t2 JGI158745 30787273 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0116
motif_0116_1

motif_0116_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000082
Motif Bicluster: 
bicluster_0116
Width: 
20
Number of Sites: 
1
Consensus: 
CAGCgnCAGCGGCagcgGCa
motif_0116_2

motif_0116_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0116
Width: 
15
Number of Sites: 
1
Consensus: 
TGgttGTGTgggTGT
 0.10
bicluster_0161
motif_0161_1

motif_0161_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0005
Motif Bicluster: 
bicluster_0161
Width: 
24
Number of Sites: 
1
Consensus: 
acCAcCaGaAgCAgCAgcAgCAgc
motif_0161_2

motif_0161_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.031
Motif Bicluster: 
bicluster_0161
Width: 
22
Number of Sites: 
1
Consensus: 
GGCAGCagCAGCAGCaGctgcA
 0.17

GO Terms

GO:0008519 GO:0015696 GO:0016020 -

ammonium transmembrane transporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

ammonium transport

GO Category: 
biological_process
Details: 
The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI158745

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