Cre03.g207700.t1.1 farnesyl diphosphate synthase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g207700.t1.1 chromosome_3 farnesyl diphosphate synthase 2 CDS 7234063 7238264 + 4 201

Phytozome

Locus Genomic View Functional Annotation
Cre03.g207700.t1.1 Cre03.g207700.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
FPPS, FPPS1, FPS1, PPS1 g4155.t1 JGI137019 30787567 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0047
motif_0047_1

motif_0047_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0015
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
tanattgTtaaAtTgaAgcnAAAg
motif_0047_2

motif_0047_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00019
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
AgcagCAGcAgCAgcAGCaggGgC
 0.18
bicluster_0182
motif_0182_1

motif_0182_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
12
Motif Bicluster: 
bicluster_0182
Width: 
24
Number of Sites: 
1
Consensus: 
cagtataTatattttAtntGTaAa
motif_0182_2

motif_0182_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00012
Motif Bicluster: 
bicluster_0182
Width: 
15
Number of Sites: 
1
Consensus: 
TgCaTGTGTGtaTgT
 0.17

GO Terms

GO:0008299 -

isoprenoid biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI137019

Add comment

Log in to post comments