Cre07.g336950.t1.1 alpha-glucan phosphorylase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g336950.t1.1 chromosome_7 alpha-glucan phosphorylase 2 CDS 3621954 3629865 - 7 911

Phytozome

Locus Genomic View Functional Annotation
Cre07.g336950.t1.1 Cre07.g336950.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PHO2, PHOA g7840.t1 JGI152708 30774895 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0093
motif_0093_1

motif_0093_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.28
Motif Bicluster: 
bicluster_0093
Width: 
21
Number of Sites: 
1
Consensus: 
cagcAccTGcAgaagCAGcAg
motif_0093_2

motif_0093_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
440
Motif Bicluster: 
bicluster_0093
Width: 
22
Number of Sites: 
1
Consensus: 
TGaACTgCgTcAgaAtGTccCT
 0.21
bicluster_0155
motif_0155_1

motif_0155_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000065
Motif Bicluster: 
bicluster_0155
Width: 
15
Number of Sites: 
1
Consensus: 
cCACaCAcgCaCaCA
motif_0155_2

motif_0155_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.024
Motif Bicluster: 
bicluster_0155
Width: 
21
Number of Sites: 
1
Consensus: 
GCCgcCaCCGCCtCCACCgCc
 0.25

GO Terms

GO:0008184 GO:0005975 -

glycogen phosphorylase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.

carbohydrate metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI152708

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