Cre07.g344600.t1.2 D-3-phosphoglycerate dehydrogenase

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g344600.t1.2 chromosome_7 D-3-phosphoglycerate dehydrogenase CDS 4663933 4672467 + 8 534
Locus Genomic View Functional Annotation
Cre07.g344600.t1.2 Cre07.g344600.t1.2

Help

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PGD1 g8018.t1, Cre07.g344600.t1.1 JGI78757 30774289 Search
Motif 1 Motif 2 Residual
bicluster_0004

motif_0004_1

e.value: 
7e-35
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
TgCTGCtgCTgCtgcTGCtGCngC

motif_0004_2

Motif Bicluster: 
Width: 
0
Number of Sites: 
1
0.27
bicluster_0017

motif_0017_1

e.value: 
0.000000036
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
CaCCGCCgCcnCcaCcgCCGCcnC

motif_0017_2

e.value: 
47
Motif Bicluster: 
Width: 
23
Number of Sites: 
1
Consensus: 
CtgttgctGcTGcTgctggTgnt
0.19
GO:0016616 GO:0051287 GO:0008152 GO:0055114 GO:0016597 GO:0048037 -

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.

NAD binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

amino acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.

cofactor binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI78757
Log in to post comments