Cre08.g360100.t1.2 translocon at the outer membrane of chloroplasts 64-V

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre08.g360100.t1.2 chromosome_8 translocon at the outer membrane of chloroplasts 64-V CDS 676563 681044 + 4 481

Phytozome

Locus Genomic View Functional Annotation
Cre08.g360100.t1.2 Cre08.g360100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
DUR2 g8433.t1, Cre08.g360100.t1.1 JGI196482 30773856 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0100
motif_0100_1

motif_0100_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1
Motif Bicluster: 
bicluster_0100
Width: 
19
Number of Sites: 
1
Consensus: 
AaAtGCTgcATTGCtAAtA
motif_0100_2

motif_0100_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.4
Motif Bicluster: 
bicluster_0100
Width: 
24
Number of Sites: 
1
Consensus: 
GGCaGTGgcGGcGGcTGcGGCtGC
 0.13
bicluster_0103
motif_0103_1

motif_0103_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000058
Motif Bicluster: 
bicluster_0103
Width: 
24
Number of Sites: 
1
Consensus: 
GCaGCagCAgCAGCAcctgCAGCA
motif_0103_2

motif_0103_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.5
Motif Bicluster: 
bicluster_0103
Width: 
21
Number of Sites: 
1
Consensus: 
AAacncCAgtagtcTtnAaaA
 0.16

GO Terms

GO:0016884 -

carbon-nitrogen ligase activity, with glutamine as amido-N-donor

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196482

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