Cre09.g389450.t1.2 U-box domain-containing protein kinase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g389450.t1.2 chromosome_9 U-box domain-containing protein kinase family protein CDS 2727631 2739456 + 11 825

Phytozome

Locus Genomic View Functional Annotation
Cre09.g389450.t1.2 Cre09.g389450.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g9509.t1, Cre09.g389450.t1.1 Not available 30780349 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0038
motif_0038_1

motif_0038_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00072
Motif Bicluster: 
bicluster_0038
Width: 
21
Number of Sites: 
1
Consensus: 
TTtGgTTTaGTtTGGGCTGGT
motif_0038_2

motif_0038_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00032
Motif Bicluster: 
bicluster_0038
Width: 
18
Number of Sites: 
1
Consensus: 
CgCtGCcGCtGCcGCcGC
 0.17
bicluster_0169
motif_0169_1

motif_0169_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0003
Motif Bicluster: 
bicluster_0169
Width: 
14
Number of Sites: 
1
Consensus: 
ACACAcGCACaCgC
motif_0169_2

motif_0169_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.1e-21
Motif Bicluster: 
bicluster_0169
Width: 
21
Number of Sites: 
1
Consensus: 
CaGCacCAgCagCagCggCAg
 0.25

GO Terms

GO:0003676 GO:0004842 GO:0016567 GO:0000151 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ubiquitin-protein ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.

protein ubiquitination

GO Category: 
biological_process
Details: 
The process in which one or more ubiquitin groups are added to a protein.

ubiquitin ligase complex

GO Category: 
cellular_component
Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

Add comment

Log in to post comments