Cre09.g397250.t1.2 fatty acid desaturase 5

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g397250.t1.2 chromosome_9 fatty acid desaturase 5 CDS 1623842 1629056 + 5 214
Locus Genomic View Functional Annotation
Cre09.g397250.t1.2 Cre09.g397250.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
FAD5A g9337.t1, Cre09.g397250.t1.1 JGI117883 30780967 Search
Motif 1 Motif 2 Residual
bicluster_0050

motif_0050_1

e.value: 
0.00000000019
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
taCAcAcACAngcgCACatna

motif_0050_2

e.value: 
8.9
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
tcgCcgCcnCCaCctCCgCcaCCg
0.16
bicluster_0172

motif_0172_1

e.value: 
2.3
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa

motif_0172_2

e.value: 
94000
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
0.14
GO:0006629 -

lipid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI117883
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