Cre10.g420350.t1.2 photosystem I subunit E-2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g420350.t1.2 chromosome_10 photosystem I subunit E-2 CDS 332041 332993 - 952

Phytozome

Locus Genomic View Functional Annotation
Cre10.g420350.t1.2 Cre10.g420350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10401.t1, Cre10.g420350.t1.1 JGI76146 30790216 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0057
motif_0057_1

motif_0057_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000052
Motif Bicluster: 
bicluster_0057
Width: 
24
Number of Sites: 
1
Consensus: 
ATAGgTCAGCAAaTGGaTGAACAT
motif_0057_2

motif_0057_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0058
Motif Bicluster: 
bicluster_0057
Width: 
21
Number of Sites: 
1
Consensus: 
GgcaGGGGnGggGcGgGGcGG
 0.05
bicluster_0186
motif_0186_1

motif_0186_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.45
Motif Bicluster: 
bicluster_0186
Width: 
15
Number of Sites: 
1
Consensus: 
TCTGCCagTTTncTT
motif_0186_2

motif_0186_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
34
Motif Bicluster: 
bicluster_0186
Width: 
20
Number of Sites: 
1
Consensus: 
AAAACTAAAAcTACcTGCAT
 0.05

GO Terms

GO:0015979 GO:0009522 GO:0009538 -

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem I

GO Category: 
cellular_component
Details: 
A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).

photosystem I reaction center

GO Category: 
cellular_component
Details: 
A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI76146

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