Cre10.g424100.t1.2 pyrophosphorylase 6

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g424100.t1.2 chromosome_10 pyrophosphorylase 6 CDS 889335 892908 - 3 573

Phytozome

Locus Genomic View Functional Annotation
Cre10.g424100.t1.2 Cre10.g424100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
IPY1 g10487.t1, Cre10.g424100.t1.1 JGI133620 30790490 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0034
motif_0034_1

motif_0034_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.028
Motif Bicluster: 
bicluster_0034
Width: 
20
Number of Sites: 
1
Consensus: 
tnAccAttATTTAttAAtAt
motif_0034_2

motif_0034_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.1
Motif Bicluster: 
bicluster_0034
Width: 
24
Number of Sites: 
1
Consensus: 
cAaATgCAGTAGCtncagCagcaG
 0.10
bicluster_0081
motif_0081_1

motif_0081_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0012
Motif Bicluster: 
bicluster_0081
Width: 
15
Number of Sites: 
1
Consensus: 
CTGCcGcTgCgACTG
motif_0081_2

motif_0081_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
21
Motif Bicluster: 
bicluster_0081
Width: 
24
Number of Sites: 
1
Consensus: 
cATAGGCAatAAaAggcATtgAag
 0.12

GO Terms

GO:0000287 GO:0004427 GO:0006796 GO:0005737 -

magnesium ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.

inorganic diphosphatase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.

phosphate-containing compound metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI133620

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