Cre10.g438850.t1.2 basic leucine-zipper 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g438850.t1.2 chromosome_10 basic leucine-zipper 2 CDS 2769177 2772294 - 3 117

Phytozome

Locus Genomic View Functional Annotation
Cre10.g438850.t1.2 Cre10.g438850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ROC76 g10808.t1, Cre10.g438850.t1.1 Not available 30790427 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0022
motif_0022_1

motif_0022_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.64
Motif Bicluster: 
bicluster_0022
Width: 
21
Number of Sites: 
1
Consensus: 
CcAcctgCaCCacCagCaCCt
motif_0022_2

motif_0022_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0022
Width: 
0
Number of Sites: 
1
 0.28
bicluster_0064
motif_0064_1

motif_0064_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000039
Motif Bicluster: 
bicluster_0064
Width: 
21
Number of Sites: 
1
Consensus: 
GcgGtGGcGGgGctGGtGgcG
motif_0064_2

motif_0064_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.048
Motif Bicluster: 
bicluster_0064
Width: 
24
Number of Sites: 
1
Consensus: 
tGcTGCTGtgGcgGCTGcGGCaGC
 0.32

GO Terms

GO:0003700 GO:0043565 GO:0006355 -

sequence-specific DNA binding transcription factor activity

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

sequence-specific DNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

regulation of transcription, DNA-dependent

GO Category: 
biological_process
Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-dependent transcription.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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