Cre16.g681900.t1.2 SECY homolog 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g681900.t1.2 chromosome_16 SECY homolog 1 CDS 5337538 5341898 - 4 360

Phytozome

Locus Genomic View Functional Annotation
Cre16.g681900.t1.2 Cre16.g681900.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SCY1 g16466.t1, Cre16.g681900.t1.1 JGI145516 30777143 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0065
motif_0065_1

motif_0065_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2
Motif Bicluster: 
bicluster_0065
Width: 
20
Number of Sites: 
1
Consensus: 
gGAnGcGGnGGCGgcGgcgG
motif_0065_2

motif_0065_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
82
Motif Bicluster: 
bicluster_0065
Width: 
15
Number of Sites: 
1
Consensus: 
GTgAGTGcATtTGCA
 0.14
bicluster_0079
motif_0079_1

motif_0079_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0018
Motif Bicluster: 
bicluster_0079
Width: 
21
Number of Sites: 
1
Consensus: 
AagcTnTatgTAttTaTgaAA
motif_0079_2

motif_0079_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00028
Motif Bicluster: 
bicluster_0079
Width: 
21
Number of Sites: 
1
Consensus: 
gCtGCcGCtaCTGctGCcaCC
 0.19

GO Terms

GO:0015031 GO:0016020 -

protein transport

GO Category: 
biological_process
Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI145516

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