Cre17.g724300.t1.2 photosystem I subunit K

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g724300.t1.2 chromosome_17 photosystem I subunit K CDS 3419254 3421201 - 1 947

Phytozome

Locus Genomic View Functional Annotation
Cre17.g724300.t1.2 Cre17.g724300.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17518.t1, Cre17.g724300.t1.1 JGI192478 30781885 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0062
motif_0062_1

motif_0062_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.8
Motif Bicluster: 
bicluster_0062
Width: 
23
Number of Sites: 
1
Consensus: 
gCTgCtGttgctGCTGtcaCTGc
motif_0062_2

motif_0062_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
11000
Motif Bicluster: 
bicluster_0062
Width: 
11
Number of Sites: 
1
Consensus: 
ATGGGTGTTGc
 0.07
bicluster_0186
motif_0186_1

motif_0186_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.45
Motif Bicluster: 
bicluster_0186
Width: 
15
Number of Sites: 
1
Consensus: 
TCTGCCagTTTncTT
motif_0186_2

motif_0186_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
34
Motif Bicluster: 
bicluster_0186
Width: 
20
Number of Sites: 
1
Consensus: 
AAAACTAAAAcTACcTGCAT
 0.05

GO Terms

GO:0015979 GO:0009522 GO:0016020 -

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem I

GO Category: 
cellular_component
Details: 
A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI192478

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