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[+] Show/hide bicluster #4 rows and columns.
bicluster 4
Phaeodactylum tricornutum
41x65
[+] Show/hide bicluster #4 rows (genes).
bicluster 4 genes
Phaeodactylum tricornutum
41
[+] Show/hide bicluster #4 rows (short gene names).
bicluster 4 short names
Phaeodactylum tricornutum
41
short_name
[+] Show/hide bicluster #4 rows (long gene names).
bicluster 4 long names
Phaeodactylum tricornutum
41
long_name
[+] Show/hide bicluster #4 rows (NCBI RefSeq gene IDs).
bicluster 4 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #4 gene upstream sequences.
bicluster 4 upstream sequences
Phaeodactylum tricornutum
40
upstream
[+] Show/hide bicluster #4 columns (arrays; conditions).
bicluster 4 arrays
Phaeodactylum tricornutum
65
[+] Show/hide bicluster #4 ratios.
bicluster 4 ratios
Phaeodactylum tricornutum
41x65
GENES GSE12015_Si_free_22v19_1 GSE12015_Si_free_23v20_1 GSE17237_highlight_12hr_3 GSE17237_highlight_24hr_3 GSE17237_highlight_30min_1 GSE17237_highlight_30min_3 GSE17237_highlight_3hr_1 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_1 GSE17237_highlight_6hr_2 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Ammonia_1 GSE34988_Ammonia_2 GSE34988_Ammonia_3 GSE34988_Ammonia_4 GSE34988_Cadmium_5 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Copper_3 GSE34988_Dispersant_3 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_3 GSE34988_Dispersed_oil_4 GSE34988_Mixture_2 GSE34988_Mixture_3 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Salinity_15ppt_2 GSE34988_Silver_2 GSE34988_Silver_3 GSE34988_Silver_4 GSE34988_Silver_5 GSE34988_Simazine_1 GSE34988_Simazine_3 GSE34988_Simazine_5 GSE42039_Dark_treated_48h_1 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42514_light_10.5hr_2 GSE42514_light_15.5hr_2 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_2 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_BlueLight_6h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep3
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50187 -1.66978127256443 -1.40597827144139 NA NA -0.701118334879078 NA -1.63010241020373 NA NA -0.0772603746205061 NA NA NA -0.708918130756808 0.387651806060795 1.46824921197704 0.396591077921727 0.102260495375201 0.0448892565160274 -0.520234389355958 2.32880269846688 -0.583719033293685 0.670010294702757 0.693266372259021 0.623434284808998 -0.232940146562983 1.0202869438842 1.10938272149897 -0.595497475919854 0.598755785084419 1.1030348262692 2.09562017898174 3.55846997653253 -0.00211541879959723 0.90413327188691 0.414988590807855 -0.994901724351669 1.28510849562205 -0.482679177291698 -0.404384145016058 0.560496977892506 -0.30085741185351 -0.243183329182223 -0.481955367390218 1.29814910216819 1.28457764441814 0.996050573307927 1.84841038425966 -0.0844233499082368 0.962095083006587 1.15717202969178 -0.260351967766125 0.0068228377662136 0.291300713943117 1.283961505585 0.286649932688055 -0.066760013136785 -0.104345289207006 -0.203557516395348 -0.737918629771875 0.0274705671200374 -0.040241349014518 -0.353878131923432
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[+] Show/hide bicluster #4 motif PSSM #1. bicluster 4 motif PSSM #1 Phaeodactylum tricornutum 21x4
POSITION A C G T
1 0 0.666667 0.333333 0
2 0.5 0.166667 0.333333 0
3 0.833333 0.166667 0 0
4 0 0 1 0
5 0.333333 0 0.5 0.166667
6 0 1 0 0
7 0 0.166667 0.833333 0
8 0 0.833333 0 0.166667
9 0 0.333333 0 0.666667
10 0 0.333333 0.333333 0.333333
11 0.333333 0.666667 0 0
12 0 0 0 1
13 0.166667 0 0.833333 0
14 0.166667 0 0.166667 0.666667
15 0 0.166667 0.666667 0.166667
16 0 1 0 0
17 0.166667 0.666667 0 0.166667
18 1 0 0 0
19 0 0.833333 0.166667 0
20 0.666667 0.333333 0 0
21 0 0.333333 0.666667 0 [+] Show/hide bicluster #4 motif PSSM #2. bicluster 4 motif PSSM #2 Phaeodactylum tricornutum 24x4
POSITION A C G T
1 0.75 0.25 0 0
2 0 0 0 1
3 0 0 0 1
4 0 0.5 0.25 0.25
5 0 0.75 0 0.25
6 0 0 0.75 0.25
7 0 0 0.5 0.5
8 0.75 0 0 0.25
9 0.25 0.25 0.5 0
10 1 0 0 0
11 0 0.5 0.5 0
12 0 1 0 0
13 0.25 0 0.75 0
14 0.25 0 0.75 0
15 0 1 0 0
16 0 0 0.5 0.5
17 0.25 0.25 0.25 0.25
18 0 1 0 0
19 1 0 0 0
20 0.5 0.25 0.25 0
21 0 1 0 0
22 0 0 1 0
23 0 0 1 0
24 0 1 0 0 |