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[+] Show/hide bicluster #9 rows and columns.
bicluster 9
Phaeodactylum tricornutum
69x59
[+] Show/hide bicluster #9 rows (genes).
bicluster 9 genes
Phaeodactylum tricornutum
69
[+] Show/hide bicluster #9 rows (short gene names).
bicluster 9 short names
Phaeodactylum tricornutum
69
short_name
[+] Show/hide bicluster #9 rows (long gene names).
bicluster 9 long names
Phaeodactylum tricornutum
69
long_name
[+] Show/hide bicluster #9 rows (NCBI RefSeq gene IDs).
bicluster 9 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #9 gene upstream sequences.
bicluster 9 upstream sequences
Phaeodactylum tricornutum
69
upstream
[+] Show/hide bicluster #9 columns (arrays; conditions).
bicluster 9 arrays
Phaeodactylum tricornutum
59
[+] Show/hide bicluster #9 ratios.
bicluster 9 ratios
Phaeodactylum tricornutum
69x59
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_12hr_2 GSE17237_highlight_24hr_1 GSE17237_highlight_24hr_3 GSE17237_highlight_24hr_3.1 GSE17237_highlight_30min_3 GSE17237_highlight_48hr_1 GSE17237_highlight_48hr_3 GSE17237_highlight_6hr_1 GSE17237_highlight_6hr_3 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_2 GSE34988_Control_1 GSE34988_Control_2 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_6 GSE34988_Copper_1 GSE34988_Copper_2 GSE34988_Copper_5 GSE34988_Oil_3 GSE34988_Silver_2 GSE34988_Silver_5 GSE42039_Dark_treated_48h_1 GSE42039_Dark_treated_48h_2 GSE42039_Dark_treated_48h_3 GSE42039_light_0.5h_2 GSE42039_light_0.5h_3 GSE42039_light_24h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_light_10.5hr_1 GSE42514_light_16hr_dark_4hr_1 GSE42514_light_16hr_dark_4hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE55959_BlueLight_0.5h_rep1 GSE55959_BlueLight_0.5h_rep2 GSE55959_BlueLight_0.5h_rep3 GSE55959_BlueLight_24h_rep2 GSE55959_BlueLight_24h_rep3 GSE55959_GreenLight_0.5h_rep1 GSE55959_GreenLight_24h_rep1 GSE55959_GreenLight_24h_rep3 GSE55959_RedLight_24h_rep3 GSE55959_RedLight_6h_rep1
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7910 -0.0875568994564469 0.274244540306153 0.262441732986419 -0.106686526396969 -0.00992166454026116 NA NA NA NA NA NA 0.0967235089054455 -0.494059202171898 0.232235625330455 0.151436330144325 0.1937630130094 1.4577450259116 -0.323747917892221 -0.79267511871688 -1.15043919941687 0.683416277143796 -0.00930823405775374 0 -2.33409480795705 0.857831163742168 -0.539656585940821 -1.77865133622985 0.652451274578232 1.0666230385988 0.784159220556412 1.2871629027511 0.516897384998078 -0.136343818448435 -1.03565655009405 -0.0990247058121678 0.176525318031851 -0.480754015442582 0.355400309276032 -0.691213869388374 -0.177252658067116 0.8420922266355 0.8420922266355 0.494313778809674 -0.2491064392042 -0.282549835710618 1.35060770450433 -0.216222791169407 0.0287324059588509 -0.105279896954225 0.808505902685204
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[+] Show/hide bicluster #9 motif PSSM #1. bicluster 9 motif PSSM #1 Phaeodactylum tricornutum 12x4
POSITION A C G T
1 0.509552 0.04402 0.436877 0.009552
2 0 0.642857 0 0.357143
3 0 0 0 1
4 0.25 0 0.642857 0.107143
5 0.964286 0.035714 0 0
6 0 0.964286 0.035714 0
7 0.25 0.071429 0.107143 0.571429
8 0.035714 0 0.964286 0
9 0 0 0 1
10 0.357143 0 0.642857 0
11 1 0 0 0
12 0.5 0.107143 0.285714 0.107143 [+] Show/hide bicluster #9 motif PSSM #2. bicluster 9 motif PSSM #2 Phaeodactylum tricornutum 21x4
POSITION A C G T
1 0.666667 0.111111 0.222222 0
2 0.666667 0.111111 0.222222 0
3 1 0 0 0
4 0.777778 0.222222 0 0
5 1 0 0 0
6 1 0 0 0
7 0.666667 0 0.111111 0.222222
8 0 0 0.555556 0.444444
9 0.666667 0.111111 0.222222 0
10 0.555556 0 0.111111 0.333333
11 0 0 1 0
12 0.444444 0.555556 0 0
13 0 0 0.555556 0.444444
14 0.555556 0.111111 0.111111 0.222222
15 0.555556 0 0.444444 0
16 0.333333 0.555556 0 0.111111
17 0.111111 0.888889 0 0
18 0.888889 0 0 0.111111
19 0.666667 0.111111 0.222222 0
20 1 0 0 0
21 0.888889 0.111111 0 0 |