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[+] Show/hide bicluster #34 rows and columns.
bicluster 34
Phaeodactylum tricornutum
38x60
[+] Show/hide bicluster #34 rows (genes).
bicluster 34 genes
Phaeodactylum tricornutum
38
[+] Show/hide bicluster #34 rows (short gene names).
bicluster 34 short names
Phaeodactylum tricornutum
38
short_name
[+] Show/hide bicluster #34 rows (long gene names).
bicluster 34 long names
Phaeodactylum tricornutum
38
long_name
[+] Show/hide bicluster #34 rows (NCBI RefSeq gene IDs).
bicluster 34 NCBI RefSeq IDs
Phaeodactylum tricornutum
0
[+] Show/hide bicluster #34 gene upstream sequences.
bicluster 34 upstream sequences
Phaeodactylum tricornutum
38
upstream
[+] Show/hide bicluster #34 columns (arrays; conditions).
bicluster 34 arrays
Phaeodactylum tricornutum
60
[+] Show/hide bicluster #34 ratios.
bicluster 34 ratios
Phaeodactylum tricornutum
38x60
GENES GSE12015_Si_free_11v18_1 GSE12015_Si_free_11v18_2 GSE12015_Si_free_22v19_1 GSE12015_Si_free_22v19_2 GSE12015_Si_free_23v20_1 GSE12015_Si_free_23v20_2 GSE17237_highlight_12hr_1 GSE17237_highlight_30min_1 GSE17237_highlight_3hr_3 GSE17237_highlight_48hr_2 GSE17237_highlight_6hr_1 GSE31131_Cadmium_0.12mg_1 GSE31131_Cadmium_0.12mg_2 GSE31131_Cadmium_0.12mg_3 GSE31131_Cadmium_1.2mg_1 GSE31131_Cadmium_1.2mg_2 GSE31131_Cadmium_1.2mg_3 GSE34988_Cadmium_1 GSE34988_Cadmium_2 GSE34988_Cadmium_5 GSE34988_Control_3 GSE34988_Control_4 GSE34988_Control_5 GSE34988_Control_6 GSE34988_Dispersant_1 GSE34988_Dispersant_2 GSE34988_Dispersant_4 GSE34988_Dispersed_oil_5 GSE34988_Oil_2 GSE34988_Oil_3 GSE34988_Salinity_15ppt_2 GSE34988_Salinity_15ppt_5 GSE34988_Silver_1 GSE42039_light_24h_1 GSE42039_light_24h_2 GSE42039_light_6h_1 GSE42039_light_6h_2 GSE42039_light_6h_3 GSE42514_dark_8hr_light_3hr_1 GSE42514_dark_8hr_light_3hr_2 GSE42514_light_16hr_dark_7.5hr_1 GSE42514_light_16hr_dark_7.5hr_2 GSE42514_light_6hr_1 GSE55959_BlueLight_24h_rep1 GSE55959_BlueLight_6h_rep2 GSE55959_BlueLight_6h_rep3 GSE55959_GreenLight_0.5h_rep2 GSE55959_GreenLight_0.5h_rep3 GSE55959_GreenLight_24h_rep2 GSE55959_GreenLight_6h_rep1 GSE55959_GreenLight_6h_rep2 GSE55959_GreenLight_6h_rep3 GSE55959_RedLight_0.5h_rep1 GSE55959_RedLight_0.5h_rep2 GSE55959_RedLight_0.5h_rep3 GSE55959_RedLight_24h_rep1 GSE55959_RedLight_24h_rep2 GSE55959_RedLight_6h_rep1 GSE55959_RedLight_6h_rep2 GSE55959_RedLight_6h_rep3
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13107 -0.0132541619859727 0.405732020353958 0.157573033385603 0.00956505520651975 -0.265533285391862 0.17817371557327 0.612093807831399 1.69910940414583 1.07224332251801 0.541547564013664 0.423771879278912 -0.162285835602997 0.305625382264782 0.158672792880852 -0.138956355359394 0.182135385224744 0.0521957899921053 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.55771002628852 -0.497668476638796 -0.370648225692865 -0.197720079509902 -0.30512325597473 0.767824830097373 1.18089388152382 -0.32806564417835 0.121539051243408 1.10465007897475 -0.334402875665087 -0.259447293039486 0.0675572945076658 -0.236947454031519 -0.125978658872575 -0.908340021822948 -1.22725104129185 -1.04053180750243 -0.982545154878979 -1.15436195675926 -1.50906193629046 -1.33855579359472 -1.99095426451547 -2.15328290991467 -1.08819293072995 -0.991613856803812 -1.38441805260178
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9400 0.649978189827045 0.744452889486185 0.255042969940475 0.0777093123835634 0.277500070679123 0.614356581758845 1.54466133942695 1.49982457622806 1.0277995501852 0.92733112777719 1.45572347667406 0 0.742354312141298 0.115057794060288 0.918874867774913 0.0624384838812827 0.865992267449318 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.803663994935833 -0.515543178667745 -0.247832882020497 -0.510607053008896 -0.573312101306031 0.424918558824865 0.183766715726293 0.477709507682972 0.136143725266213 0.543244449384589 -0.761745020827756 -0.85966529389026 -0.268722752455883 -2.00617332892439 -1.98519171071341 -0.959629123825105 -1.14732550300409 -1.4329277380656 -0.224672811627134 -1.89276776772234 -1.91164765399783 -2.36415950471 -0.726901801014189 -1.04836862988038 0.0300428867594715 -1.32291897155212 -0.240381338747967
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[+] Show/hide bicluster #34 motif PSSM #1. bicluster 34 motif PSSM #1 Phaeodactylum tricornutum 12x4
POSITION A C G T
1 0.833333 0 0.125 0.041667
2 0.125 0.25 0 0.625
3 0 0.083333 0 0.916667
4 0.416667 0 0.583333 0
5 1 0 0 0
6 0.041667 0.958333 0 0
7 0.458333 0 0 0.541667
8 0 0 0.916667 0.083333
9 0 0 0 1
10 0.291667 0 0.708333 0
11 0.916667 0.083333 0 0
12 0.375 0 0.458333 0.166667 [+] Show/hide bicluster #34 motif PSSM #2. bicluster 34 motif PSSM #2 Phaeodactylum tricornutum 15x4
POSITION A C G T
1 0.4 0.3 0.3 0
2 0.15 0.55 0.3 0
3 1 0 0 0
4 0.8 0.1 0.05 0.05
5 0.05 0.9 0 0.05
6 0 0.1 0.9 0
7 0.25 0.4 0.3 0.05
8 1 0 0 0
9 0.5 0.5 0 0
10 0.15 0.45 0.4 0
11 0.9 0.1 0 0
12 0.95 0 0.05 0
13 0.45 0.15 0 0.4
14 0.1 0.8 0.1 0
15 0.4 0 0.6 0 |